| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0567 |
|---|
| Symbol | |
|---|
| ID | 8331895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 652838 |
|---|
| End bp | 653857 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644953719 |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| Protein accession | YP_003111345 |
|---|
| Protein GI | 256389781 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.140708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.209954 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCACAC GCGCGGCAGT CGTCCAGGGA GTGGGCGGGT GCGTGCCGCC CCGCTCCGTC
GACAACAACG AACTGAGCTC ACGGTTGGAG ACCTCCGACG CGTGGATCAG AGAACGGCTC
GGCATCGGCC GGCGGTACGT CGCCGACGGC GTCTCGACCG TGGACCTGGC CGTGGAGGCC
GGAGCCCGGG CCCTGGAGAT GGCCGACGCC GGCGCCGGAC TCGGGCCGCT GGACGTCGTG
CTGCTGGCCA CCACGACCCC GGACCGATTA TGCCCGGCGT CGGCGCCGGA GGTGGCCTCG
CGGCTGGGGT ACACCGGGAT CGCGGCGTTC GACGTCAACG CGGTGTGCGC GGGTTTCGTG
CACGCCCTGG CCACGGGGAA CGCGCTGATC CGGGGGCACA TGGCCGACCG GGTGCTGGTG
ATCGGCGCGG ACACCTTCAC CACCCTGGTC GATCCCGCCG ACCGGCTGAC CGCCTCGATC
TTCGGCGACG GCGCCGGAGC GCTGGTGCTG CGGGCCGGGA CGCCGGACGA GCCGGGCGCG
CTGCGGGCCT TCGACCTGGG CAGCGACGGC TCGCAGGTGG CGACGGTGGA GGTACCGGGG
GGCGGGGCGC GGGACCGGCT GGGGATGCCG GTGGCGAATC AGAGGCCGTA TCTGGTGATG
GACGGTCCCG CCGTGTTCCG GCGCGCGGTC CAGGAGATGA CCGCGTCCTC GCTGCGGGTG
CTGGCGAAGG CGAAGTGGGA CGCGGGGTCG GTGCGGCGGT TCGTTCCACA CCAGGCGAAC
ATCCGGATCA TCCGCGGGGT CGCAGAACGG CTGGGGATCG GCGCGGAGCG CGTGGTCGCG
AACATCGAGG ACGTGGGGAA CACGGTCGCG GCGTCGATCC CGCTGGCACT GGCCGACGCG
CACGACAGCG GACGGCTCGG CGCCGGGGAG CGGGTGCTGA TGACCTCGAT CGGCGCCGGG
CTGGCGTGGG GGTCGGCGGT GCTGACGTGG CCGGAGCTGC AGGGGAAGGC ACGGTTGTGA
|
|---|
| Protein sequence | MTTRAAVVQG VGGCVPPRSV DNNELSSRLE TSDAWIRERL GIGRRYVADG VSTVDLAVEA
GARALEMADA GAGLGPLDVV LLATTTPDRL CPASAPEVAS RLGYTGIAAF DVNAVCAGFV
HALATGNALI RGHMADRVLV IGADTFTTLV DPADRLTASI FGDGAGALVL RAGTPDEPGA
LRAFDLGSDG SQVATVEVPG GGARDRLGMP VANQRPYLVM DGPAVFRRAV QEMTASSLRV
LAKAKWDAGS VRRFVPHQAN IRIIRGVAER LGIGAERVVA NIEDVGNTVA ASIPLALADA
HDSGRLGAGE RVLMTSIGAG LAWGSAVLTW PELQGKARL
|
|---|
| |