Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0552 |
Symbol | |
ID | 8331879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 637426 |
End bp | 638598 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644953704 |
Product | hypothetical protein |
Protein accession | YP_003111331 |
Protein GI | 256389767 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.581187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00305062 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGCTGACGA TTATCGACCT TGAGGGGCTG GGGCTCGACG CCGGAGCCCA TCTCGTTCTC AACCGGGCCC TGACCGGCCT GCCAGCCGGC GGGCGCCTGG CCGTTGTCGG CGGAAACCAG ATGCTCGGGG TGCAACTCGG AGCCTGGTGC AGGTCGGAGG GCCACGGGTT CGACCCCGCA GACCCGCCCG TGGTCATTAA GGGCACGGCG GACGACGCCC GAGCCCGCGC CACTCAGCGG GCGGGATCCC CATCGCATGT CGACGAGCGG GCTGATGCCG CGTGGGGGCT TGCGGCTCGA GGGGCTCTCG TCGAGCCCGG CGGCCCGCTT TTGTCTGTGG ACTGGGTCGA CCGTGATTTG GTTTGGGCCG ACGTGGCGCC GAGGCTGTAT TCGCGTGCCG CCGCCGAACA GTGGGATCCG GCGACTGCTA TCGACTGGGC CTCGCACGCC GATGTGCCCG ACGAGGTCGA GGACGCGGTG GTCCAGATAA TGACCTACCT GATCGAGAAC GAACAGGCGG CACTCATGCT CCCGGCGCGC CTGCTGGCAC GCCTGCATCC GCACTTCCGC GAAGTCATGC AGTTGTTCGC CGTGCAGATA GCCGACGAGG CGAGGCACGT CGAGGTCTTC ACCCGCCGTG CCTTGCTGAG CCGAGACGAA CTCGGCGTGT CCGGGGCGGG TGGACGCGCG TCCCTCCAGA CCCTGCTCGA CGAGCCTGAC TTCACACTGG CCTCGTTCCT GCTGTCGGTG CTCGGGGAGG GCAGTTTTCT CGATCTGCTG CGGTTCCTCA ATGTGCACGC GCCCGATCCG ATCACTGCGA CGATGACCAG CTTGGTCGGT CGCGACGAGG CCCGGCACGT GGCATTCGGT GTTGCCCATA CTGCACATGC GGCGAAGGCC GACGCGCGTT TCCTCGGACG CCTCCGCATG GCGGTGGAGC GCCGCCATAC AGCTCTGATT GACACGGCGG GCCTCAACAA ACAGGTGTTT GACGCCCTCG TCGTCCTGGC CGCCGGATCG TGGGAGACCT CTGCGATCGC GAAGGGCTGG CGCGCGGTCG AAGAGCTGCA GAAGCGGATG GAAGACGGTC GTCGTCACCG GCTGAGCTTG ATCGGCTTTC CCGACGACGA AGCGGCAGAA CTCGCTGCTC TGCACACCCG TAACTTCATG TGA
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Protein sequence | MLTIIDLEGL GLDAGAHLVL NRALTGLPAG GRLAVVGGNQ MLGVQLGAWC RSEGHGFDPA DPPVVIKGTA DDARARATQR AGSPSHVDER ADAAWGLAAR GALVEPGGPL LSVDWVDRDL VWADVAPRLY SRAAAEQWDP ATAIDWASHA DVPDEVEDAV VQIMTYLIEN EQAALMLPAR LLARLHPHFR EVMQLFAVQI ADEARHVEVF TRRALLSRDE LGVSGAGGRA SLQTLLDEPD FTLASFLLSV LGEGSFLDLL RFLNVHAPDP ITATMTSLVG RDEARHVAFG VAHTAHAAKA DARFLGRLRM AVERRHTALI DTAGLNKQVF DALVVLAAGS WETSAIAKGW RAVEELQKRM EDGRRHRLSL IGFPDDEAAE LAALHTRNFM
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