| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0547 |
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| Symbol | |
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| ID | 8331874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 631695 |
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| End bp | 633119 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644953699 |
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| Product | MiaB-like tRNA modifying enzyme YliG |
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| Protein accession | YP_003111326 |
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| Protein GI | 256389762 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.028203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00348537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCGGCTA GTCGTGGCAC GGTATCGCTC GTCACATTGG GCTGCGGACG AAACGAAGTC
GATTCCGAGG AGCTCGCGGC TCGTCTCGAG TCGGCAGGGT GGGAACTCGC CGATCCTGAC
TCCGTCCCGG GTGAGTCTGA CATCATCGTA GTCAATACCT GCGGCTTCAT AGAATCGGCG
AAGAAGACGT CGCTGGAGAC GCTTGTCGCA GCGTCCAATG CCGAAGCGAA AGTAGTAGCC
GTAGGCTGTG TGGCCGAGCG CTACGGCAAG AGGCTTGCCG AGGCCCTGCC GGAGGTCGAC
GCTGTACTGT CCTTCGACGA TTATCCCGAC ATATCACAGC GCCTCGACGA TGTCGTGCGA
GGGAAGAAGC ACGAGTCCCA CACGCCGCGC GACCGCCGGC GTCTGCTTCC AATTGCGCCC
GTGGATCGTG CGAACAACAG CAGCGTGGTG GCACCGGGCC ACGGAATAGT CAGGCAGGAC
TCCGAAGCTG GTTTGGGCGG CTCTATCTTC CTGCGGAAGC GACTGGGCGG CGGAGGCCCA
CTGGGTGACG GAGTGGTTGC ACCGCTGAAG CTAGCCTCCG GCTGTGATCG TCGGTGCTCG
TTCTGCGCCA TACCTTCGTT CAGAGGTGCC TTCATCTCGC GCACCCCCGA TGACATCGTT
GCCGAAGCCG AATGGCTCGC TGACGCTGGC GTTCGTGAAC TGATTCTCGT TAGCGAGAAC
TCCACTTCGT ACGGCAAGGA CTTCGGCGAC CTCCAAGCCT TAGAGAAGCT GTTGCCGAGG
CTCACATCCC TGGTGAGTCG CGTTCGGATC AGCTACCTTC AGCCGGCCGA GCTTCGTCCC
ACGCTCATTG AAGCCATAGG GGGCATCCCC GGTGTCGCGT CATATTTCGA CTTGTCGTTC
CAGCATGCCA GCGGCCCCGT CTTGCGGAGG ATGCGCCGCT TCGGTGATCG TGAGCGTTTC
CTAGAACTGC TTGACAAGAT CCGCGTTATC GCCCCCGAGG CCGGCATGCG ATCCAACTTC
ATCGTCGGCT TTCCAGGGGA GACAGAGGAC GACTACGGCG AGGTCGAGAG GTTTGTCTCT
GAGGCGAGGC TCGACGCGGT CGGTGTCTTC GGCTACTCCG ACGAGGAGGG CACCGAAGCG
TTGGGACTAC CCGACAAGGT GGAGCAGTCT CAGATCGCAG ATCGGGTCGC CAGGCTGACC
GTGATCTCAC GGAAGGCGAT GGACGACCGC GCGGCGGAGA GGGTCGGCTC CGAGATCGAG
GTCATTGTCA AGCATCCAGG CCGAGGTTGG GCAGCACATC AGGCACCGGC TGTCGACGGA
TTCGTGACGC TGACGGGGAG CTCGTCAGAG GCCGGGGATG TCCTGCGTGC GCGAGTCACC
GGACAGGACG GCGCGAACCT CATCGCCGAA GCACTCGCGA AATAA
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| Protein sequence | MAASRGTVSL VTLGCGRNEV DSEELAARLE SAGWELADPD SVPGESDIIV VNTCGFIESA
KKTSLETLVA ASNAEAKVVA VGCVAERYGK RLAEALPEVD AVLSFDDYPD ISQRLDDVVR
GKKHESHTPR DRRRLLPIAP VDRANNSSVV APGHGIVRQD SEAGLGGSIF LRKRLGGGGP
LGDGVVAPLK LASGCDRRCS FCAIPSFRGA FISRTPDDIV AEAEWLADAG VRELILVSEN
STSYGKDFGD LQALEKLLPR LTSLVSRVRI SYLQPAELRP TLIEAIGGIP GVASYFDLSF
QHASGPVLRR MRRFGDRERF LELLDKIRVI APEAGMRSNF IVGFPGETED DYGEVERFVS
EARLDAVGVF GYSDEEGTEA LGLPDKVEQS QIADRVARLT VISRKAMDDR AAERVGSEIE
VIVKHPGRGW AAHQAPAVDG FVTLTGSSSE AGDVLRARVT GQDGANLIAE ALAK
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