| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0539 |
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| Symbol | |
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| ID | 8331866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 623267 |
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| End bp | 624508 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644953696 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003111323 |
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| Protein GI | 256389759 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.557555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.112071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCGA GCGAGCAGGG GAAACATGTG ACGCAGGTGC AGCCTCCACC AGTGCGGCGG
CTGTGGTCCG CCGTCTTCTT CGGGTACCTC GCGCTGGGGG CGACGCTCCA GGAACTGCCC
GGCTACATGA CGTCGAAGTT CGGCGACGGC CCCACGATCA TCGGCGTCGC GGTGGGCATC
GCCTACCTGG GCACCGCCGT GACCCGACCG TTCGCCGGCC GGGCCGGGGA CGCGGGGCTG
GCCAGGAACG TCTCCGTAGC CGGCGGCGCG ATCACCACGC TGGCCGCCCT CGGCCAGCTG
ACCGCCCCGT CCGCGCTCGT GCTGATCATT TTCCGGCTGC TGATGGGCAT CGGCGAGGGG
GCGCTGTTCT CCGGCTGCCT GCCCTGGGTG CTCACGGGGA TCGCGGCCGA CCGGCGCGGC
CGGATCGCGG GCTGGTTCGG ACTGTCGATG TGGGGCGGCC TGGCGCTCGG GCCGCTGGCC
GCGGTCGGGG TGAACCACCT CGGCGGGTCG ACCGCGACGT GGTGGACGAT CTTCGGCCTG
CCGCTGGTTT CCAGCGTGCT GATCGCCTCC ACCAGGCCGC AGCCCGCGGT CTCGCCCCGA
CGCGAGATCC GGCCGCAGGG CTGGCGGGAC ATCGTGCCGA TCGGCGTCAG CGTGCCGGGC
ATCGTGCTCG GGCTCGCCGC CTACGGCTAC GGCACCCTGA ACGCACTGCT CGTCCTTTAT
TTGACGCACG ACCACATCGG CGGCCAGGGC ATCGGCCTGA CCGTGTTCGC CGTGGCGTTC
CTGGCCACAC GCGCCGCCGG CAGCCCCCTG ACCGACCAGT ACGGCGGCAT CCGGGTCGCC
CGGGTCACGC TGGTCGTCGA GATCGCCGGG CTCTGCGTTC TGGCCGCCTC CTCCTCCCAG
GGCGGTGCGC TGGCCGGCTG TGTCGTCACC GGCATCGGGC TCGGCGTCAT CTATCCGTCC
ACCAGCAAGA TCACACTCGG CCGCACCGGT CCGCTGCAGG CCGGCGTGTC GATGGGCACG
ATGACCTCGT TCTGGGACCT GGGGATCATG GCGGCCGGGC CGATCAGCGG CGCGGTCGCG
GCGCACCTGG GGTACCGGGA GGGCTTCGGG GTCGCGGCGG CGGTGACCGT CGCGGCGCTG
GTGCTCACGG TGCTGGGGCT GCATACGGAC TCCCCGGCGG AGGCGCCCAC GTCGGTGCCG
CGGTCGGTCC CGGCTGGCGC GCAGGTGCGC CCGCGCGCCT GA
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| Protein sequence | MASSEQGKHV TQVQPPPVRR LWSAVFFGYL ALGATLQELP GYMTSKFGDG PTIIGVAVGI
AYLGTAVTRP FAGRAGDAGL ARNVSVAGGA ITTLAALGQL TAPSALVLII FRLLMGIGEG
ALFSGCLPWV LTGIAADRRG RIAGWFGLSM WGGLALGPLA AVGVNHLGGS TATWWTIFGL
PLVSSVLIAS TRPQPAVSPR REIRPQGWRD IVPIGVSVPG IVLGLAAYGY GTLNALLVLY
LTHDHIGGQG IGLTVFAVAF LATRAAGSPL TDQYGGIRVA RVTLVVEIAG LCVLAASSSQ
GGALAGCVVT GIGLGVIYPS TSKITLGRTG PLQAGVSMGT MTSFWDLGIM AAGPISGAVA
AHLGYREGFG VAAAVTVAAL VLTVLGLHTD SPAEAPTSVP RSVPAGAQVR PRA
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