| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0537 |
|---|
| Symbol | |
|---|
| ID | 8331864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 620305 |
|---|
| End bp | 621366 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644953694 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003111321 |
|---|
| Protein GI | 256389757 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.156236 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCG GGGCGAGCAC GGGGACGGAC GGCGGGAGCG CGCAGGAAGG CACGGCCGGC
TCCGATACCG AGGGGCACGC GCACGACGCG CACGACGAGG TTGGGCCACC GGGCCGTGAC
GGCCTGCGCA GCCTGCCCGG TTCCGCGGAT CTCTACAACC GGTGGGAGTC CCGGCAGTGG
AGCGTCGCGG GGCTCGACCT CGCGCGGGAC CGCCGACGCT TCGCTGAGCT CAGGCCGTTC
GCCCGGCGCG AGATCCTGAG CGCGCTCGCC GAACTCGAGA TCGGAGAGTC CTGCGTCACC
CGGACGCTCA GCGCCCTCGC GGACCACGCG CCGGATGAGG CCGACCGCCT CTATCTGTGT
ACACAGATGG CCGACGAGGC CCGGCACGTA CGGTTCTTCC AAAGCTACCT GTCCGACGTC
GCGGGCATAG CCGCCGAGCA GCTGGAACCG CACGGCGCGA TGGGCGGCGA GTCCGGGTTC
GGCGTGGTGT ACGACCCGTT GCTGACCCGG CACACCGCAG CCGTGCGGAC CCGGCCCGAC
GACCGGCGGG TCTGGCATGT CGCGGTGGTC TCCTACCACC TGCTCGCCGA GGGGCTGCTC
GCTGTCGCAG GGCTGCGCGC GCTGCGGGCC CTGGCCAAGA GCTGCGAGCT GACCGCGCTG
TCCGAGGGGC TCGCGAACGT CGTGCGTGAC GAGGCACGGC ATGTGACGTT CGGCCTGGCC
GCGACCCGGC GCGGGGCACA GTCGGGATAC GCCGATGCGA TCGGCGAGGC GTATCTGGAC
GGCCTCGGCG CGGCGACCAG GGTGCTGGTG AACCCGGCCC GGCGCGCGGC CAGTCCGGTG
CTGCCGACGG CGCTGCGCGC GTATGCCGGG AACCTGGCCG CGGAGTGGTC CGCGGCGAAC
GCGCGAATGT GCCGGCATGT CGAGGTGGTC GGGCTCGCGG CCCTGGACAC ATCGGCCAAC
CTGTGTTGGA GCAGCGGGCT CGACGCCGCG TTCGCTGAGT ACCGGGAGCG TTGGGGTGCC
CACCATCCGG TGGCACGGGC CCGCCAGCTG GGTCTGGTCT GA
|
|---|
| Protein sequence | MSGGASTGTD GGSAQEGTAG SDTEGHAHDA HDEVGPPGRD GLRSLPGSAD LYNRWESRQW
SVAGLDLARD RRRFAELRPF ARREILSALA ELEIGESCVT RTLSALADHA PDEADRLYLC
TQMADEARHV RFFQSYLSDV AGIAAEQLEP HGAMGGESGF GVVYDPLLTR HTAAVRTRPD
DRRVWHVAVV SYHLLAEGLL AVAGLRALRA LAKSCELTAL SEGLANVVRD EARHVTFGLA
ATRRGAQSGY ADAIGEAYLD GLGAATRVLV NPARRAASPV LPTALRAYAG NLAAEWSAAN
ARMCRHVEVV GLAALDTSAN LCWSSGLDAA FAEYRERWGA HHPVARARQL GLV
|
|---|
| |