Gene Caci_0497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0497 
Symbol 
ID8331824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp575177 
End bp576604 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content62% 
IMG OID644953661 
Productprotein of unknown function DUF955 
Protein accessionYP_003111288 
Protein GI256389724 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000656756 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00190239 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGCCG AAGGAGCGAT CACCGAGAGC TCATCGTGGA CTAACACTTC CGTTTTGCTG 
TTTGTCGGCG ATGATGACCC GTTGGCGGCA GTCACTGCTC TCGCCAAGAA GATCATAAAC
GAGGCCGAAG ACTGTGGGCT TCAGGGGCCG CCGTTTGATC CTTTTGCCCT CGCCGAGTTG
CTTGGGCTGT CGCTGCGAGC GCGGGCTGAC ATAGCAGACG CTCATATCAG TGCAGACACC
ATTGGGGTCA GATCGACTCC AGACGCCCCG CTAGGGCACT TTGTCCAGGC CAAGCGGTCA
CTGGCAATCG AATACAACCC GACGCGGCCA CGAGGCCGCC TTCGCTACAG CGTTGCTCAC
GAGATCGCCC ATGCACTGTT TCCCGACGTC GCGGACGTAG TGCGGCATCG TACGGGGAGC
GGTGGTGTGG CGGGGTACGG CGGTGACGAC TCTTGGCAGC TTGAGCTGTT GTGCAACGTC
GTGGCCGCTG AGCTGTTGAT GCCGGACCAA GCAGTTGCCG GACTCATTGA TATCGATCCC
GATATCGACT TCATCATGGA GTACCGACGG CGCTTTGACG TTTCCACCGA AGCGCTGCTG
CGAAGGCTTG TCGGTCTGAC GGGACGGGGC CTGGCACTCG TTGCAGCCTC ACGCTCGCAG
GACGACGCTA GCGCATCCCT GATCGTCGAG TACGTGGTCG GATCGGCTCA GTTCTCCCCG
CGTGTGCACC GAGGCGCCAC AGTGTCCTCG GCTGGTGCGT TCGGAAAATG CGTTGCCGTG
AGCCAGACTG CCCGGGGTGT GGAGACACTT GAGACGGTGC CTTTGCGGGT GCAAGCCGTC
GGTGTACCGC CGTATCCCGG CTTCTCCCTA CCGCGCGTGC TCGCGCTCGT TGAGCCGGTC
GTCCCCATCG GCAAGGAGTC GGGTGGACTG CGTTATCGAA GCGGTGATGT CACCAACTTC
TCTGCGGGTG ACAGGCCAGT CGTGATCGCT CATGTCGTAA ACGACTCGGC GCATGCGTGG
AGTCGCCGCG GTGTCGCGGC TGCGCTTTCG ACACGTTTCC CGGCCGCAGC GCGTGCCTTT
CAAGCGTGGA CGGTAGCAGC GCCGACGAAT TTGGAGCTGG GTCGCGTACA CGCTGTTGAC
GTCACGACCG GTCAGAGCCT GGTCACGATC GCGAGCATGG TGGTGCAGCG CGGGTACGGA
GCGGGATTCT CAACTCGGCT GGACTACCAA GCGTTGGATA CTGCGCTTGC CGCTGTCGCA
AAGTTCGCGC TCACAAAAGG TGCAGACGTC CACTTGCCCC GAATCGGAGC TGGGCAGGCA
GGGGGGCGCT GGGACCTGAT TGCACAGGCG ATTGAGCGCA ACTTGGTTGG TGCCGGCCTG
GAGGTTGTTG TCTACACCCT GCCTCAGCGC CCGCGGGGAA AGACTTAG
 
Protein sequence
MAAEGAITES SSWTNTSVLL FVGDDDPLAA VTALAKKIIN EAEDCGLQGP PFDPFALAEL 
LGLSLRARAD IADAHISADT IGVRSTPDAP LGHFVQAKRS LAIEYNPTRP RGRLRYSVAH
EIAHALFPDV ADVVRHRTGS GGVAGYGGDD SWQLELLCNV VAAELLMPDQ AVAGLIDIDP
DIDFIMEYRR RFDVSTEALL RRLVGLTGRG LALVAASRSQ DDASASLIVE YVVGSAQFSP
RVHRGATVSS AGAFGKCVAV SQTARGVETL ETVPLRVQAV GVPPYPGFSL PRVLALVEPV
VPIGKESGGL RYRSGDVTNF SAGDRPVVIA HVVNDSAHAW SRRGVAAALS TRFPAAARAF
QAWTVAAPTN LELGRVHAVD VTTGQSLVTI ASMVVQRGYG AGFSTRLDYQ ALDTALAAVA
KFALTKGADV HLPRIGAGQA GGRWDLIAQA IERNLVGAGL EVVVYTLPQR PRGKT