Gene Caci_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0478 
Symbol 
ID8331805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp544071 
End bp545078 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content70% 
IMG OID644953644 
Productglycosyl transferase family 2 
Protein accessionYP_003111271 
Protein GI256389707 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.677803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.931373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTCA GCATCATCAT GGCCACCTAC GACAAGCGGG ACTATCTGGA GTACACGCTC 
GCGTCGCTGG CCGGGCAGAC GCACTCCGAC TTCGAGCTCG TACTCTGCGA CGACGGCACC
GAGGGCGGCG TGGCCGATCT GATCGCGCCG TACCGGGACC GCTTCGCCAT CGTCCCGCTC
GTCCAGGCGA ACGCCGGCCG CGCGGCGGCG CGGAACACGG CGCTGGCTCG AGCCTCGGGC
GACCTGGTGG TGTTCAGCGA CGACGACCGG ATCCTGCCGC CGGAGTTCCT CGCGGCGCAC
GTGTCCGCGC ACAGCGCCGG GGGTGAGGAG GACCTGGCGG TGATCGGCTG GAAGAAGCGC
GGGGTCACCG TGTGGATCCC GCGGATGCTC CCGGTCGACG AAAGCGACCT CACGACCCTG
GCCCGGCGCG TGGGCGGCGT CGAACCCCTG GCATCCCCGC TGCGCACCAT CGAGCCGGGC
GACGTGGCGG TCTCCTACCC GGTGGCCGTC AGCCGCATGG AACTCGGGGA CGAACCAGAC
AACTACCACG CGATCGTCGA CAAGTACGGG GACGAACTGG CGGACTTCCG CTTCGGCTGG
GTCCTCGCGA CGACGGCCAA CCTGTCAGTG CCGCGCGCGC TCCTCGACAA GATCGGCGGC
TTCGACGACG GATTCCAGGG CTGGGGCGTC GAGGACACCG ACCTGAGCTA CCGGCTGTGG
CAGGCCGGCA CCCGCTTCCG GATCGAGCGC GCGGCAGTGA ACCACCACCA GGTCCATCCC
ATCGGCACCG GCAACGCCCT GCTCGACAAC CGGCGCCGCC GGGCAGCGCT GATGGCGAAC
GTCGAGTTCT TCTGCCGCAA GCACCAAACG CTGGAGGCAT ACCTGTTCAA GCGGCGCTGG
GAGCACGCGA TGACGCTCGA CGAGGCGAAC CGGCTGCTGG CTGAAGTGGA GGCCGGCGTC
GGCCACTCGG TGCGGGAGGA GCTGTTGCGG TTGTACGCCG CGGCGTGA
 
Protein sequence
MKVSIIMATY DKRDYLEYTL ASLAGQTHSD FELVLCDDGT EGGVADLIAP YRDRFAIVPL 
VQANAGRAAA RNTALARASG DLVVFSDDDR ILPPEFLAAH VSAHSAGGEE DLAVIGWKKR
GVTVWIPRML PVDESDLTTL ARRVGGVEPL ASPLRTIEPG DVAVSYPVAV SRMELGDEPD
NYHAIVDKYG DELADFRFGW VLATTANLSV PRALLDKIGG FDDGFQGWGV EDTDLSYRLW
QAGTRFRIER AAVNHHQVHP IGTGNALLDN RRRRAALMAN VEFFCRKHQT LEAYLFKRRW
EHAMTLDEAN RLLAEVEAGV GHSVREELLR LYAAA