Gene Caci_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0471 
Symbol 
ID8331798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp533624 
End bp534736 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content69% 
IMG OID644953637 
Producthistidine kinase 
Protein accessionYP_003111264 
Protein GI256389700 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTGA CGCTGCTTTA CGCGGCGCTG TTCCTCGCCT CCGGCATAGT GCTGCTCGCC 
GTCGCGCTGT ATCTGGTGTT CCGCAACCCG ATCCTGGTCA CGTTCGACCC GACGCCGCCG
AGCCTGCCGT CGCCGATGCC GGGCAGGTCC GACGTGCTGC GCGTCTTCCG GCCGGCCACC
GGAACGGTCA GTCCCACCTG GGCCACCGTG CGCGCGGCTG CCGCACAGTC GGCCGGGGTC
TTGGCGGCGA TGGCCGCGGT GTCGACCCTG CTGGGCTGGA TCGTCGCCGG CCGGGTACTC
AGTCCTCTGC GAACCATGGC GTTCCGGACG CGCCGCATCT CCGAGCAGAA CCTGCATGAA
CGCCTGGCGC TCACCGGTCC GCGCGACGAG ATGACGGAGC TGGCCACCAC GATCGACGGT
CTGCTCGGCC GGCTGGAAGC CGCCTTCGAG GCGCAGCGCC GGTTCATCGC CAACGCCTCG
CACGAGCTGC GGACCCCGTT GGCCATGATG CGTACCTCCC TCGATGTCGC GGTCGCCAAG
CCGGGACGAC CGCGCGAAGT GGACGTGTTG GGCGGCAAAC TACGCGAAGG CTTGGACGCC
GCGGACCGGT TGCTGGAAGG CCTGCTGCTG TTGGCCCGGA CCCAGAACGT CGAGCGGATG
GAGACCTCTG CCGTGTCGTT GCCGGACCTG CTCGACGCCG CGCTCCACGC GCGCAGGGCC
ACGATCGAGG ACAAGCGCCT CTTGGTGGAA CAGAAGGTTG AGCCCGTGCT GTACCGAGGC
AACGACACGT TGCTGGCAAG TCTCGTGGAC AACCTCGTGG ACAACGCGAT CCGCCATAAC
GAGCCCGGCG GCTGGTTGCG CGCACAGGTC ACGGTCCCGC GCGGCGAGCA TGACAGAACC
CGCATCATCG TCGAGAACGG CGGGCCGCTC TTGACCCGGG CCGAAGTGGA CCTGCTCGGG
CAGCCGTTCC AACGCCTCGG CTCGCAACGG ACGTCGCAGC CGGGCACCGG CTTGGGCTTG
TCCATCATCG CGGCGATCGC CGAGGTGCAT CATGGCAGGC TGCTGCTCCA GGCCCGGGAC
GAGGGCGGAC TGCGCGCGGA GGTGGAGCTG TGA
 
Protein sequence
MRLTLLYAAL FLASGIVLLA VALYLVFRNP ILVTFDPTPP SLPSPMPGRS DVLRVFRPAT 
GTVSPTWATV RAAAAQSAGV LAAMAAVSTL LGWIVAGRVL SPLRTMAFRT RRISEQNLHE
RLALTGPRDE MTELATTIDG LLGRLEAAFE AQRRFIANAS HELRTPLAMM RTSLDVAVAK
PGRPREVDVL GGKLREGLDA ADRLLEGLLL LARTQNVERM ETSAVSLPDL LDAALHARRA
TIEDKRLLVE QKVEPVLYRG NDTLLASLVD NLVDNAIRHN EPGGWLRAQV TVPRGEHDRT
RIIVENGGPL LTRAEVDLLG QPFQRLGSQR TSQPGTGLGL SIIAAIAEVH HGRLLLQARD
EGGLRAEVEL