Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0471 |
Symbol | |
ID | 8331798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 533624 |
End bp | 534736 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644953637 |
Product | histidine kinase |
Protein accession | YP_003111264 |
Protein GI | 256389700 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGTTGA CGCTGCTTTA CGCGGCGCTG TTCCTCGCCT CCGGCATAGT GCTGCTCGCC GTCGCGCTGT ATCTGGTGTT CCGCAACCCG ATCCTGGTCA CGTTCGACCC GACGCCGCCG AGCCTGCCGT CGCCGATGCC GGGCAGGTCC GACGTGCTGC GCGTCTTCCG GCCGGCCACC GGAACGGTCA GTCCCACCTG GGCCACCGTG CGCGCGGCTG CCGCACAGTC GGCCGGGGTC TTGGCGGCGA TGGCCGCGGT GTCGACCCTG CTGGGCTGGA TCGTCGCCGG CCGGGTACTC AGTCCTCTGC GAACCATGGC GTTCCGGACG CGCCGCATCT CCGAGCAGAA CCTGCATGAA CGCCTGGCGC TCACCGGTCC GCGCGACGAG ATGACGGAGC TGGCCACCAC GATCGACGGT CTGCTCGGCC GGCTGGAAGC CGCCTTCGAG GCGCAGCGCC GGTTCATCGC CAACGCCTCG CACGAGCTGC GGACCCCGTT GGCCATGATG CGTACCTCCC TCGATGTCGC GGTCGCCAAG CCGGGACGAC CGCGCGAAGT GGACGTGTTG GGCGGCAAAC TACGCGAAGG CTTGGACGCC GCGGACCGGT TGCTGGAAGG CCTGCTGCTG TTGGCCCGGA CCCAGAACGT CGAGCGGATG GAGACCTCTG CCGTGTCGTT GCCGGACCTG CTCGACGCCG CGCTCCACGC GCGCAGGGCC ACGATCGAGG ACAAGCGCCT CTTGGTGGAA CAGAAGGTTG AGCCCGTGCT GTACCGAGGC AACGACACGT TGCTGGCAAG TCTCGTGGAC AACCTCGTGG ACAACGCGAT CCGCCATAAC GAGCCCGGCG GCTGGTTGCG CGCACAGGTC ACGGTCCCGC GCGGCGAGCA TGACAGAACC CGCATCATCG TCGAGAACGG CGGGCCGCTC TTGACCCGGG CCGAAGTGGA CCTGCTCGGG CAGCCGTTCC AACGCCTCGG CTCGCAACGG ACGTCGCAGC CGGGCACCGG CTTGGGCTTG TCCATCATCG CGGCGATCGC CGAGGTGCAT CATGGCAGGC TGCTGCTCCA GGCCCGGGAC GAGGGCGGAC TGCGCGCGGA GGTGGAGCTG TGA
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Protein sequence | MRLTLLYAAL FLASGIVLLA VALYLVFRNP ILVTFDPTPP SLPSPMPGRS DVLRVFRPAT GTVSPTWATV RAAAAQSAGV LAAMAAVSTL LGWIVAGRVL SPLRTMAFRT RRISEQNLHE RLALTGPRDE MTELATTIDG LLGRLEAAFE AQRRFIANAS HELRTPLAMM RTSLDVAVAK PGRPREVDVL GGKLREGLDA ADRLLEGLLL LARTQNVERM ETSAVSLPDL LDAALHARRA TIEDKRLLVE QKVEPVLYRG NDTLLASLVD NLVDNAIRHN EPGGWLRAQV TVPRGEHDRT RIIVENGGPL LTRAEVDLLG QPFQRLGSQR TSQPGTGLGL SIIAAIAEVH HGRLLLQARD EGGLRAEVEL
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