| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0459 |
|---|
| Symbol | |
|---|
| ID | 8331786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 520055 |
|---|
| End bp | 521302 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644953625 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_003111252 |
|---|
| Protein GI | 256389688 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACTG CGCTGCTGTG CGCTGCCCTG CTGATGTCGG CCGCACCGCT GGTCGCGGTG
CCCGCGCACG CCGACGCTGG TGCCGGCGCG CGGCGCGGGC CGGGCGAGTG CGCCGCCTCC
CCCGCCCCGG TGTCGGGTCC GGCGGGCGAT CGGGCGCGCG CCGTCGCCGA CGCCGTCGCG
AAGGTGCGGC ACGACCTGAA GCTGCGGTCG GTGATCACCC GCGTGACGCA GGACGGCCGC
GACGTGTGGA CCGGCGCGCT CGGACCGTCC ATGACCGGCG TCCCGGCCCG GACCGACATG
CGCTTCCGCG CCGGCTCGGT GGGCATCGCG TTCATGGGCG TGATGCTGAT GCAGCTGGTC
GACGAGAAGC GGGTCAGCCT CGCCGACCCG ATCTCGCGCT GGCTTCCCGA GGTGCCGCAC
GCCGACCAGA TCACGCTCGG GATGCTCGGC GACTCCACCA GCGGCATCCA GGACTACGTC
AAGAACCCCG CCTTCGTGGC CGAGCTGCTG GCGCATCCGT TCAAGCAGTG GACGCCCCAG
GAGCTGCTCG CCTTGGCGAA TCCGCAGACC CCGCTCTACG CGCCGGGCAA GAACTTCAGC
TACTCGCACG CCAACTACGT ACTGCTCGGC GCCGCCCTGG AGCGCATCAC CCACACCCGG
CTCGACCGCC TGCTGCAGCA GCGCATCTAC CCCCGCTTCG GGCTGCACGC GACGGCGAAC
AGCTTCACGC CCGACATCCC CGCCCCCGCG CTGCACGCCT TCACCACGGC GCGCGGCCCG
TTCGAGGAGT CGTCGTTCTG GAACCCCTCC TGGACCACCG CGCCCGGCGC CGTGATCACC
ATGGACGTCT GCGACCTCGC CCGCGCGGGC CAGGGCGTCG GCGTGGGCAC GACCCTGACC
CGCCAGGGGC ACCAGACCTT CCTCAACCCC GGCACGGTCG GCCTGGGCAC CCCGCAGCCC
TACCTCCCCG GCGGCGACTG CCCCGCCGCG ATCTGCATCC CGCAGACCGC GGCGGCCCAC
TACGGCCTGG GCGCGCTCGT GGTCAACGGC TGGGTCTTCC AGAACCCTTC CTTCACCGGT
TACGCGGCCC TCATGGCCTA CCTGCCGTCG CAGCACCTGA CGATCGCGGT GAGCGTGACC
ACCTCGGCCG ACACCGACCC GGACATCGTC AACGCCGGCA AGAACGTGGC CGTGGCGATC
TCGCAGGCGC TCGTGCCGAG CAACCCGCTG ACATTCGGGC CCTTCTAG
|
|---|
| Protein sequence | MRTALLCAAL LMSAAPLVAV PAHADAGAGA RRGPGECAAS PAPVSGPAGD RARAVADAVA
KVRHDLKLRS VITRVTQDGR DVWTGALGPS MTGVPARTDM RFRAGSVGIA FMGVMLMQLV
DEKRVSLADP ISRWLPEVPH ADQITLGMLG DSTSGIQDYV KNPAFVAELL AHPFKQWTPQ
ELLALANPQT PLYAPGKNFS YSHANYVLLG AALERITHTR LDRLLQQRIY PRFGLHATAN
SFTPDIPAPA LHAFTTARGP FEESSFWNPS WTTAPGAVIT MDVCDLARAG QGVGVGTTLT
RQGHQTFLNP GTVGLGTPQP YLPGGDCPAA ICIPQTAAAH YGLGALVVNG WVFQNPSFTG
YAALMAYLPS QHLTIAVSVT TSADTDPDIV NAGKNVAVAI SQALVPSNPL TFGPF
|
|---|
| |