Gene Caci_0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0449 
Symbol 
ID8331776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp506478 
End bp507128 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content71% 
IMG OID644953615 
Productsortase family protein 
Protein accessionYP_003111242 
Protein GI256389678 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3764] Sortase (surface protein transpeptidase) 
TIGRFAM ID[TIGR01076] LPXTG-site transpeptidase (sortase) family protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGGG CGGGGGTGCC GGTGGCGGTC TTGGCGATTC CGAGTGTCGG GGTTGATGAG 
GTTGTCGGGG AGGGGACTGG TGCGGCGGTT TTGGAGTCCG GGCCGGGTTT GCGGCGGGAC
ACCGTCTTGC CGGGGCAGGC GGGGACGAGT GTGATCATGG CGCGTGCCTC GGGGTACGGC
GGTCCGTTCC GGTATCTCGA CCAGTTGCAG CCTGGGGATC GCGTCGAGGT GACGACCGGT
CAGGGGGTGG CGGACTACCG CGTCTCGGAT GTCCGGCGGC GCGGCGACCC GGAACCTGCG
CGGCTGCATG GCCAGTTGGG CCGCCTGACT CTGGTCACCG CGTCCGGTGC CGCGTATACG
CCGAATGGTG CGTTGTACGT CGATGCCGAC CTGATCTCGG ACGTTCAGCC GACCCCGCCG
GCTCCGGTTC CGCATCCCGG CGCTGAGGAG TCCGCGATGG GCGAGGACCG GTACGCGCGG
CCTGATGTCG CCGCCTGGAC CGCGGTGTTG GCGGGCGCGA CGGTTTTGGC GTTCTGGGCC
GGGCCGCGGT GGGGGCGGGC CAAGACGTGG CTGGTCGCTG TGCCGGTGCT GCTTGTCGTG
GGGCTGACGC TCGCGGACCG GATCGCCCTG CTGTTGCCGA ATCTGACCTG A
 
Protein sequence
MLRAGVPVAV LAIPSVGVDE VVGEGTGAAV LESGPGLRRD TVLPGQAGTS VIMARASGYG 
GPFRYLDQLQ PGDRVEVTTG QGVADYRVSD VRRRGDPEPA RLHGQLGRLT LVTASGAAYT
PNGALYVDAD LISDVQPTPP APVPHPGAEE SAMGEDRYAR PDVAAWTAVL AGATVLAFWA
GPRWGRAKTW LVAVPVLLVV GLTLADRIAL LLPNLT