Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0449 |
Symbol | |
ID | 8331776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 506478 |
End bp | 507128 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953615 |
Product | sortase family protein |
Protein accession | YP_003111242 |
Protein GI | 256389678 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGGG CGGGGGTGCC GGTGGCGGTC TTGGCGATTC CGAGTGTCGG GGTTGATGAG GTTGTCGGGG AGGGGACTGG TGCGGCGGTT TTGGAGTCCG GGCCGGGTTT GCGGCGGGAC ACCGTCTTGC CGGGGCAGGC GGGGACGAGT GTGATCATGG CGCGTGCCTC GGGGTACGGC GGTCCGTTCC GGTATCTCGA CCAGTTGCAG CCTGGGGATC GCGTCGAGGT GACGACCGGT CAGGGGGTGG CGGACTACCG CGTCTCGGAT GTCCGGCGGC GCGGCGACCC GGAACCTGCG CGGCTGCATG GCCAGTTGGG CCGCCTGACT CTGGTCACCG CGTCCGGTGC CGCGTATACG CCGAATGGTG CGTTGTACGT CGATGCCGAC CTGATCTCGG ACGTTCAGCC GACCCCGCCG GCTCCGGTTC CGCATCCCGG CGCTGAGGAG TCCGCGATGG GCGAGGACCG GTACGCGCGG CCTGATGTCG CCGCCTGGAC CGCGGTGTTG GCGGGCGCGA CGGTTTTGGC GTTCTGGGCC GGGCCGCGGT GGGGGCGGGC CAAGACGTGG CTGGTCGCTG TGCCGGTGCT GCTTGTCGTG GGGCTGACGC TCGCGGACCG GATCGCCCTG CTGTTGCCGA ATCTGACCTG A
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Protein sequence | MLRAGVPVAV LAIPSVGVDE VVGEGTGAAV LESGPGLRRD TVLPGQAGTS VIMARASGYG GPFRYLDQLQ PGDRVEVTTG QGVADYRVSD VRRRGDPEPA RLHGQLGRLT LVTASGAAYT PNGALYVDAD LISDVQPTPP APVPHPGAEE SAMGEDRYAR PDVAAWTAVL AGATVLAFWA GPRWGRAKTW LVAVPVLLVV GLTLADRIAL LLPNLT
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