Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0436 |
Symbol | |
ID | 8331763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 485889 |
End bp | 487886 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644953602 |
Product | hypothetical protein |
Protein accession | YP_003111229 |
Protein GI | 256389665 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.871831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.17474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTGG CCCAGCTGCC GAACCCCGGC GGTCCCCACC TCATCGCGCA GGCGGAGAGG TCTGCGGTCG CGGTCCTCGC GCCCGAAGCT CCTCCGGAGC CGGGCGCGGA GCCCGCGCTG TGCCTGATCG GGTCAGGGTT CTTCATCACC ACCGATCTGG TGCTGACCTG TGCCCACGTC GTCGCCGACG AGCCTGAGCT CTACGTCCTG AGCGGCAGCG TGACCCTGCG CGTCAAAGCC GTCGAGCTGA TCGACCCGCC CTACGACGGC GACGACTCCT GGCCGGTGCC GGACCTGGCC CTGCTGCGCA TCGAACCCGC GCCGCCGGAC GACGAGAGCG ATCCCTACCC GGTGTGGCTG GACCTCGCGC CCAACGCGTC CTTCATCAGC AGCGCCGGCT ACCTCAGTGT GGGCTACGAC AAGCGCGGTC CCGGCGGAGC GGCGGCGCTC GCCAGCCGGC TCTACGATGC CGGCGGCACG CGCAAGGCGA ACGCCCCGGG GCTGCCGAGC TTCACCTACG TCGAGCTCGC CGGCAACACC GTCCCGACAT ACCGTTCCGG CAGCATGGTC ATCGACCTGA GCACCGGACG CGTGACCGGC ATCGTCAAAG CAGCCCGCGC CGAGGACGAC GGCGACGGCG GCTACGCGGT CCCCCTGGCC GGCGTCCTGC CGCGCGTACT GTCGCGCCAA CTGGGAGTCC AGAAGGCGAA GGACATCCTG GCAGCGCACG ACTCGTTCCA CGCCCGGACC GTGGATTGGC CCGCCATGTG CGAGCACTAC TTCACCGGTC CCCAGCCGCC TGGCGCCATA CGGGCAGACT CCACAAAGCT CCCCCTGAAC GAAGTCGCCC TCCTCGGTCT CCTGGTATCG ATCCGCCACG TCGTCACCGA CGCCGAACTC TTCGAGATCA TCCAGAGCCA CAGCGGCCTG GAGCTCGCCG CCGACGCCGG CCTCCGCGAC GTCGCCCTCG GCCTGGCCGC GACCACCACC TGGAGCTCCA CTGACGTCCA CAGCCTCCTG CGCTTCATGG ACGGCTTGAC CACGCGCCTC GAACACCGCG TCAGCCAGCA GTGGCTGGCC GAAGCGCGGA AGTGGGCTGA TGGTCTGGCC GCGAAGCTCA ACCAAACCTC CCGCCTCCGT GCCCTGCGCA TGCAGACATC CGCAATACGC CGTACTTCCG GGGCGGCAGA GGCGGGTAGC AGCTCCCTGC GGGTACTCGT CGATCCGGCG TTCGATCCGG CGGGCGGGTA TCACGTCAGT ATCCGTATGC ACCACAGCGC CGGGGTCGGC GCGGAGCAGT CTCCGGAGGA GACCATCGGC AGTGCGAGTG TCCTGGCGCA TCTCCGCGAT GTCCTGCCCG CCGCGGTCCG GGCCGCCGCG CGCCTGGACG GCGGCTGCCT GATCGACCTC GTCCTGCCGC TGGACCTGCT GGCCGAGCCG GTGCACAAGT GGGAGGTCTC CGGCTCCACG CCGCTCGGCC ACCTGCTTCC GGTCGCGGTC CGCTCGGTGG AGCGCTACCG GGACCGGGAC GACGTGCCGG GCGCCAGGCT GCGCGAGATC TGGGACCGGG CGTCTAAGGA GGCTGTTTCG CTTCAGTGGA TCATGTGCGA GGATCCTGAG AACACCGGCC GGGCCGTGGA GCACACCGGG CTCGGGCTGG TGAACCCGCC CACCAGCCGG CACCGGCGAT CCCGGCGTCT GCTCGACGAG GCGGTCCAGG ACGGCGTGCC GCTGCTGGTC TGGTCGGCGT CCGACTGCGG GGTGGACCAC GCCGATCCGC AGAACGTGTC AGTGCTCTGT GCAGGCCCGT ATTTTCAGGG AATAGCGGAA GAAGCGCTGC GCGACGTCGT TCTGGAAGAT GTGCCTCATC GGCTCTTCGC CAAGCGCAGC CAGGCCGGAG CCGAGGAATT GGACGCCGTG GCTCTGTTCT GGGACAACCC GGGATTGGGG CACGAAGAGA ACCTGTTGAC AGAACCCTGC TATCCAGAGG ACTCGTGA
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Protein sequence | MALAQLPNPG GPHLIAQAER SAVAVLAPEA PPEPGAEPAL CLIGSGFFIT TDLVLTCAHV VADEPELYVL SGSVTLRVKA VELIDPPYDG DDSWPVPDLA LLRIEPAPPD DESDPYPVWL DLAPNASFIS SAGYLSVGYD KRGPGGAAAL ASRLYDAGGT RKANAPGLPS FTYVELAGNT VPTYRSGSMV IDLSTGRVTG IVKAARAEDD GDGGYAVPLA GVLPRVLSRQ LGVQKAKDIL AAHDSFHART VDWPAMCEHY FTGPQPPGAI RADSTKLPLN EVALLGLLVS IRHVVTDAEL FEIIQSHSGL ELAADAGLRD VALGLAATTT WSSTDVHSLL RFMDGLTTRL EHRVSQQWLA EARKWADGLA AKLNQTSRLR ALRMQTSAIR RTSGAAEAGS SSLRVLVDPA FDPAGGYHVS IRMHHSAGVG AEQSPEETIG SASVLAHLRD VLPAAVRAAA RLDGGCLIDL VLPLDLLAEP VHKWEVSGST PLGHLLPVAV RSVERYRDRD DVPGARLREI WDRASKEAVS LQWIMCEDPE NTGRAVEHTG LGLVNPPTSR HRRSRRLLDE AVQDGVPLLV WSASDCGVDH ADPQNVSVLC AGPYFQGIAE EALRDVVLED VPHRLFAKRS QAGAEELDAV ALFWDNPGLG HEENLLTEPC YPEDS
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