Gene Caci_0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0436 
Symbol 
ID8331763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp485889 
End bp487886 
Gene Length1998 bp 
Protein Length665 aa 
Translation table11 
GC content69% 
IMG OID644953602 
Producthypothetical protein 
Protein accessionYP_003111229 
Protein GI256389665 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.871831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.17474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGG CCCAGCTGCC GAACCCCGGC GGTCCCCACC TCATCGCGCA GGCGGAGAGG 
TCTGCGGTCG CGGTCCTCGC GCCCGAAGCT CCTCCGGAGC CGGGCGCGGA GCCCGCGCTG
TGCCTGATCG GGTCAGGGTT CTTCATCACC ACCGATCTGG TGCTGACCTG TGCCCACGTC
GTCGCCGACG AGCCTGAGCT CTACGTCCTG AGCGGCAGCG TGACCCTGCG CGTCAAAGCC
GTCGAGCTGA TCGACCCGCC CTACGACGGC GACGACTCCT GGCCGGTGCC GGACCTGGCC
CTGCTGCGCA TCGAACCCGC GCCGCCGGAC GACGAGAGCG ATCCCTACCC GGTGTGGCTG
GACCTCGCGC CCAACGCGTC CTTCATCAGC AGCGCCGGCT ACCTCAGTGT GGGCTACGAC
AAGCGCGGTC CCGGCGGAGC GGCGGCGCTC GCCAGCCGGC TCTACGATGC CGGCGGCACG
CGCAAGGCGA ACGCCCCGGG GCTGCCGAGC TTCACCTACG TCGAGCTCGC CGGCAACACC
GTCCCGACAT ACCGTTCCGG CAGCATGGTC ATCGACCTGA GCACCGGACG CGTGACCGGC
ATCGTCAAAG CAGCCCGCGC CGAGGACGAC GGCGACGGCG GCTACGCGGT CCCCCTGGCC
GGCGTCCTGC CGCGCGTACT GTCGCGCCAA CTGGGAGTCC AGAAGGCGAA GGACATCCTG
GCAGCGCACG ACTCGTTCCA CGCCCGGACC GTGGATTGGC CCGCCATGTG CGAGCACTAC
TTCACCGGTC CCCAGCCGCC TGGCGCCATA CGGGCAGACT CCACAAAGCT CCCCCTGAAC
GAAGTCGCCC TCCTCGGTCT CCTGGTATCG ATCCGCCACG TCGTCACCGA CGCCGAACTC
TTCGAGATCA TCCAGAGCCA CAGCGGCCTG GAGCTCGCCG CCGACGCCGG CCTCCGCGAC
GTCGCCCTCG GCCTGGCCGC GACCACCACC TGGAGCTCCA CTGACGTCCA CAGCCTCCTG
CGCTTCATGG ACGGCTTGAC CACGCGCCTC GAACACCGCG TCAGCCAGCA GTGGCTGGCC
GAAGCGCGGA AGTGGGCTGA TGGTCTGGCC GCGAAGCTCA ACCAAACCTC CCGCCTCCGT
GCCCTGCGCA TGCAGACATC CGCAATACGC CGTACTTCCG GGGCGGCAGA GGCGGGTAGC
AGCTCCCTGC GGGTACTCGT CGATCCGGCG TTCGATCCGG CGGGCGGGTA TCACGTCAGT
ATCCGTATGC ACCACAGCGC CGGGGTCGGC GCGGAGCAGT CTCCGGAGGA GACCATCGGC
AGTGCGAGTG TCCTGGCGCA TCTCCGCGAT GTCCTGCCCG CCGCGGTCCG GGCCGCCGCG
CGCCTGGACG GCGGCTGCCT GATCGACCTC GTCCTGCCGC TGGACCTGCT GGCCGAGCCG
GTGCACAAGT GGGAGGTCTC CGGCTCCACG CCGCTCGGCC ACCTGCTTCC GGTCGCGGTC
CGCTCGGTGG AGCGCTACCG GGACCGGGAC GACGTGCCGG GCGCCAGGCT GCGCGAGATC
TGGGACCGGG CGTCTAAGGA GGCTGTTTCG CTTCAGTGGA TCATGTGCGA GGATCCTGAG
AACACCGGCC GGGCCGTGGA GCACACCGGG CTCGGGCTGG TGAACCCGCC CACCAGCCGG
CACCGGCGAT CCCGGCGTCT GCTCGACGAG GCGGTCCAGG ACGGCGTGCC GCTGCTGGTC
TGGTCGGCGT CCGACTGCGG GGTGGACCAC GCCGATCCGC AGAACGTGTC AGTGCTCTGT
GCAGGCCCGT ATTTTCAGGG AATAGCGGAA GAAGCGCTGC GCGACGTCGT TCTGGAAGAT
GTGCCTCATC GGCTCTTCGC CAAGCGCAGC CAGGCCGGAG CCGAGGAATT GGACGCCGTG
GCTCTGTTCT GGGACAACCC GGGATTGGGG CACGAAGAGA ACCTGTTGAC AGAACCCTGC
TATCCAGAGG ACTCGTGA
 
Protein sequence
MALAQLPNPG GPHLIAQAER SAVAVLAPEA PPEPGAEPAL CLIGSGFFIT TDLVLTCAHV 
VADEPELYVL SGSVTLRVKA VELIDPPYDG DDSWPVPDLA LLRIEPAPPD DESDPYPVWL
DLAPNASFIS SAGYLSVGYD KRGPGGAAAL ASRLYDAGGT RKANAPGLPS FTYVELAGNT
VPTYRSGSMV IDLSTGRVTG IVKAARAEDD GDGGYAVPLA GVLPRVLSRQ LGVQKAKDIL
AAHDSFHART VDWPAMCEHY FTGPQPPGAI RADSTKLPLN EVALLGLLVS IRHVVTDAEL
FEIIQSHSGL ELAADAGLRD VALGLAATTT WSSTDVHSLL RFMDGLTTRL EHRVSQQWLA
EARKWADGLA AKLNQTSRLR ALRMQTSAIR RTSGAAEAGS SSLRVLVDPA FDPAGGYHVS
IRMHHSAGVG AEQSPEETIG SASVLAHLRD VLPAAVRAAA RLDGGCLIDL VLPLDLLAEP
VHKWEVSGST PLGHLLPVAV RSVERYRDRD DVPGARLREI WDRASKEAVS LQWIMCEDPE
NTGRAVEHTG LGLVNPPTSR HRRSRRLLDE AVQDGVPLLV WSASDCGVDH ADPQNVSVLC
AGPYFQGIAE EALRDVVLED VPHRLFAKRS QAGAEELDAV ALFWDNPGLG HEENLLTEPC
YPEDS