| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0432 |
|---|
| Symbol | |
|---|
| ID | 8331759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 480710 |
|---|
| End bp | 482398 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644953598 |
|---|
| Product | cellulose-binding family II |
|---|
| Protein accession | YP_003111225 |
|---|
| Protein GI | 256389661 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3979] Uncharacterized protein contain chitin-binding domain type 3 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.302151 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGGG CTCTCCGAGC AAGCCTGATC GCTGCTGGCG CCGGCGCTCT GCTGGTCAGC
GGCCTGACAA TCGCCTCCCC GACAGCTTCG GCCGCCACGA CCCCAACCCC GACCGCCACC
GCGCCCACCA CCCCGACCGC CACCGCGCCC ACCACCCCGA CCCCGTTGCC CACCGCCGTC
TACAGCAAGA CCTCCGACTG GGGCAGCGGC TTCCAGGCGC AGTACGTGAT CACCAACCCG
ATGTCCGTCC CGCTGAACAC CTGGTCGCTC CAGTTCAGCC TGCCGTCCAC CGAGAAGATC
ACCAGCATGT GGGGCGGGAC CGACACCGCG AGCGGTACCA CGCACACCGT CCTCGCGCAG
TCCTACGACA CCACGATCGC GGCCGGCGCG TCGATCACCA TCGGTTTCGA CGGCAGCTAC
TCGGGGACGT ACGCGGACCC GTCCGCCTGC AAGCTCAACT CAGACCCCTG TGACGGCAGC
GCGGACGCCC AAGCCCCGAC CGCGCCGACG GCACTGACCA CGCTGAGCAC CACCTCGAGC
GCCGCGTCGC TGTCCTGGAC CGGCTCCGCC GACAACGTCA CGGTCGCCGG GTACAACGTG
TATTCGGGTT CGACGATGGT CGCCACGTCC CCGGGCACGG CGGCGACCGT CACCGGTCTG
GCGCCCTCGA CGTCCTACTC GTTCACCGTC CGCGCCGTCG ACGAAGCCGG GAACCTGTCG
GCGCCGAGCG CAGCGGTCAG CGCCACGACG CTGGCAAGCA CCGGCGGCGG ACACCTGCCC
GGCGTCGCCG CGCCTTTCGT CGACATCGGC GCCTGGCCCA CCCCGAACCT GACCCAGATC
GCCGAGACGA CAGGCCTGCG CCAGTTCTCC CTCGGCTTCA TCGTCAACGG CACGGCCACC
TGCACCCCGA GCTGGTTCAA CGCCTACGCC ATGTCCGCCG GCTTCGAGCA GTCGGACATC
GCCACCCTGC GCGCGATCGG CGGCGACGTG AAGCCGTCCT TCGGCGGCGA GGCGGGCACC
GAACTGGCGC AGTCGTGCAC CGACGTCCCG TCCCTGACAG CCGCCTACCA ATCGGCCATC
ACCGCCTACA ACCTCACCCA GATCGACTTC GACATCGAGG GCTCCGCAGT CGCCGACCCC
GCCTCCATCG ACCGCCGCTC CCAAGCCATA GCCGCCCTGC AGAAGAACGC AGCCGCAGCC
GGCAAGCCCC TCACCGTCAC CCTGACCCTC CCGATCCTCC CCTCCGGCCT CACCACCGAC
GGCCTCTACG TAGTCCAGTC AGCAGTGAAG TACGGCGCCA AGATCACCAC AGTCAACGGC
ATGGCCATGG ACTTCGGCGA CATAGAAGCC CCCAACCCCA GCGGCAAGAT GGGCACCTAC
GCCATCGACA CAGCCCAATC ACTCCACACC CAACTGACGC CCCTCTACCC AGCCCTCACC
GCAACCCAGC TGTGGAACAT GATCGGCGTC ACCCCCATGA TCGGCCAGAA CGACAACTCC
TCCGAAGTCT TCTACCAAAC CGACATGCAC CAACTCCTCA CCTTCGCCCA ACAACAACAC
CTCGGCGAAC TAGCCTTCTG GGACGTCACC CGCGACGCCA ACGCCTGCAC CGGCTCCCTG
TCAAAGTGCA CGGACATCCC ACAGACCCCC TACGAGTTCT CCAAGATGAT CGCGCCCTAT
CAAGGCTGA
|
|---|
| Protein sequence | MLRALRASLI AAGAGALLVS GLTIASPTAS AATTPTPTAT APTTPTATAP TTPTPLPTAV
YSKTSDWGSG FQAQYVITNP MSVPLNTWSL QFSLPSTEKI TSMWGGTDTA SGTTHTVLAQ
SYDTTIAAGA SITIGFDGSY SGTYADPSAC KLNSDPCDGS ADAQAPTAPT ALTTLSTTSS
AASLSWTGSA DNVTVAGYNV YSGSTMVATS PGTAATVTGL APSTSYSFTV RAVDEAGNLS
APSAAVSATT LASTGGGHLP GVAAPFVDIG AWPTPNLTQI AETTGLRQFS LGFIVNGTAT
CTPSWFNAYA MSAGFEQSDI ATLRAIGGDV KPSFGGEAGT ELAQSCTDVP SLTAAYQSAI
TAYNLTQIDF DIEGSAVADP ASIDRRSQAI AALQKNAAAA GKPLTVTLTL PILPSGLTTD
GLYVVQSAVK YGAKITTVNG MAMDFGDIEA PNPSGKMGTY AIDTAQSLHT QLTPLYPALT
ATQLWNMIGV TPMIGQNDNS SEVFYQTDMH QLLTFAQQQH LGELAFWDVT RDANACTGSL
SKCTDIPQTP YEFSKMIAPY QG
|
|---|
| |