Gene Caci_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0423 
Symbol 
ID8331750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp473819 
End bp474556 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content67% 
IMG OID644953589 
Producthypothetical protein 
Protein accessionYP_003111216 
Protein GI256389652 
COG category[C] Energy production and conversion 
COG ID[COG2864] Cytochrome b subunit of formate dehydrogenase 
TIGRFAM ID[TIGR01583] formate dehydrogenase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.158904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.64717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCGA TGGCTGGCTC GACGCCTGAG CGGCGGCGCA GTTGGGTGCG CGGCAGGCTG 
CGGGACGGCA AAGTGGCGCG GGAGGGCGGG GTGCAGAAGG GCAGGGTGCG CGAGGGCAGA
GTCCGCCGCT TCACCGTCGC CGAGCGGATG GTCCACCGCG GCACCGGCGT GCTGATGCTG
CTGTGCGTGG CGACCGCGGC GTGCCTGTAC ATCGGGCCGC TGGCTCAAGC TGTGGGCCGG
CGGCATCTCA TGGTCACTGT GCACGAGTGG TCCGGAATCC TGCTGCCCGC ACCGGTTTTG
CTCGGGCTGC TCTCGCCGGC GTTCCGCGCC GACCTGCGTA GGCTGAACCG CTTCGCACCC
GCGGACCGGC ACTGGCTCCG GGCGGTCCGC CGCCGTCTGA TGGAGCCGCC GGACCGTCCC
GCCGGCAAGT TCAACGCCGG GCAGAAGCTC TATGCGGGCT GGATCGCCGG CGCGGTACTG
GTGATGATGT TCACCGGGCT GCTGATGTGG TTCACGCACC TGTTGCCGGG CATCTCCCGG
ACGAGTTCCA TCTTCGTGCA CGACATCCTT GCCTGGGGCA TAGCCGTCGT ACTGCTGGCG
CACATGCGCA AGGCATATCA GGATCCAGAG TCACGACGGG GTATGCGGAC CGGATACGTG
GACCGGGTGT GGGCTAAGCG CAATCATTCC GAGTGGCTCG CGAAAGACGA ACCAGACGGT
TCGCATCAGC AGGTATAA
 
Protein sequence
MTSMAGSTPE RRRSWVRGRL RDGKVAREGG VQKGRVREGR VRRFTVAERM VHRGTGVLML 
LCVATAACLY IGPLAQAVGR RHLMVTVHEW SGILLPAPVL LGLLSPAFRA DLRRLNRFAP
ADRHWLRAVR RRLMEPPDRP AGKFNAGQKL YAGWIAGAVL VMMFTGLLMW FTHLLPGISR
TSSIFVHDIL AWGIAVVLLA HMRKAYQDPE SRRGMRTGYV DRVWAKRNHS EWLAKDEPDG
SHQQV