Gene Caci_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0422 
Symbol 
ID8331749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp471902 
End bp473704 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content69% 
IMG OID644953588 
Productserine/threonine protein kinase 
Protein accessionYP_003111215 
Protein GI256389651 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.709913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.835899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTGGCT GGATTGTTCC CGGCTACACG GAAACCGGGA TCTTAGGCGC CGGCGCGACC 
GGCAGGGTAG TGGCGGCCGT CCATGACGCG ACCGGCACCG AAGTCGCGAT TAAATACCTG
AGTCCGCGGT TCGTGAACAA CCCGGACTTC ATCGAGCGCT TCCGCGAGGA GGCGGCGCTG
CTGGCCGAGA TCCGGCATCC GAACGTGGTC CAGCTCTTCG AATACGCGGA GTCGGACGAG
GGCTCGGCGA TGGTGATGGA GTTGGTCTCC GGGCCGACCC TGCACCGCAT GCTGCACGAG
AACGGCCGCA TGGCGCCGGA GGCGGCGCTG TCGGTGATGC GCGGCTCGCT GCTGGGCCTG
GGCGCCGCGC ACCAGATGGG CATCGTGCAC CGCGACTACA AGCCGTCGAA CGTGCTCCTC
AACGCCTACG GAATCAGCAA GCTGGCGGAC TTCGGCGTCG CCGAGCGCGC CGAGCCGGTC
AGCGAGATCG ACCCGGACGC CACCATGCCC GGCGGCACCG GCACACCGGC GTACATGGCG
CCGGAGCAGT GGGACGGCGC ACCGGCCCAG CCGGTGACGG ACATCTACGC GGTGACCGCG
TCGTTCTTCG AGTGCCTGAC CGGCAAGGTC CCCTTCTCCG CGGACACCGT CTACGAACTC
GAGGAGAAGC ACCGCACCGC GCCGATCCCG CTGGACGACG TGCCCGAAGG CGTGCAGCCG
CTGGTCGCGC ACGGCTTGGC GAAGGACCCC GCCGAGCGGC CGCAGGACGT GTGGGCGTTC
GTCGCCGAAG TCGAGCGCGC CGCGACCGAC GCCTACGGCG TGGACTGGGA GGAGCGCGGC
CGGCAGGACA TCGTCGCGCT GTGGCCGCTG TTCGGGTTCT TCGTCCCAGG CGGCGCGGCC
GGCGGCGGGG GCGCACTGGA GACGCTGGGA ATCGGCCCGA ACGGTCCCGC CGATCCGGGC
GAGCCCGGCG ACCTGGACGC ACCGCACGCC TCCGGTCCCG AGGATGACGA CTGGGACGAC
GGCCACGGCT CACATCGCAG CCGCCTGCCG GACAAGGTGA AGACGGCGGC CATCGTCGCC
GGCGTGGCGG CGGTCGTCCT CGCGATCGCC GCGGTGGCCG TCGCCGGCAA CGGCAAGCCC
GCGAAGAAGG CCAGCCCGCC GAGCTCGACA TCGTCGGTGT TCACGCCGAC CCCCGACGGC
CCGACCGGCA CGCCGACGAG CAACGACGCA GGCTCCGCGC CGACGGTCGC GGTGTCGAGT
TCTAGTTCGG GTTCGGGTTC GAGTTCGAGT TCGGGTTCTA GTTCGAGCTC GTCGGGCTCC
AGCTCGAGCT CGAGTTCCAG CTCCCGGTCG AGCTCATCGT CGCCCTCGAC GAAGCCGTCC
TCCAAGCCCT CGACATCGCC GAGTTCGGTG TCGCTGCCGA GCACGCCGTC GACGAGCAGT
CCGTCGTCCT CGCCGAGCAC GCCCTCGACG AGTACTTCAT CGTCGCCGCA GGTGTCGATC
GGTGCGACGG TGTCAGTAGT GAGCGATCCG CCCGGGCAGT GCGTCGCCAG CTACAACGTG
ACATTCGCAG TGGGTAACGC GCCGGGCGGC ACCGTGGTCG TCAACTACAC CTGGCATCTC
GCGAGCGGTC GCCTCGTCCC TGAAGGACCG GTCACACTCA AGTCGAACAG CTCACAAGGA
TTCGGGATCA GAGAGACCTC CAACGGAACT CCGAAGGGCA GCGTCGTCTT CGTGACCTGG
ACGACCGCTT CGAGCAGTGG CACATCGAAC AGCGCGCCGG TAAGCATCAC CTGTCTCAAG
TAG
 
Protein sequence
MSGWIVPGYT ETGILGAGAT GRVVAAVHDA TGTEVAIKYL SPRFVNNPDF IERFREEAAL 
LAEIRHPNVV QLFEYAESDE GSAMVMELVS GPTLHRMLHE NGRMAPEAAL SVMRGSLLGL
GAAHQMGIVH RDYKPSNVLL NAYGISKLAD FGVAERAEPV SEIDPDATMP GGTGTPAYMA
PEQWDGAPAQ PVTDIYAVTA SFFECLTGKV PFSADTVYEL EEKHRTAPIP LDDVPEGVQP
LVAHGLAKDP AERPQDVWAF VAEVERAATD AYGVDWEERG RQDIVALWPL FGFFVPGGAA
GGGGALETLG IGPNGPADPG EPGDLDAPHA SGPEDDDWDD GHGSHRSRLP DKVKTAAIVA
GVAAVVLAIA AVAVAGNGKP AKKASPPSST SSVFTPTPDG PTGTPTSNDA GSAPTVAVSS
SSSGSGSSSS SGSSSSSSGS SSSSSSSSRS SSSSPSTKPS SKPSTSPSSV SLPSTPSTSS
PSSSPSTPST STSSSPQVSI GATVSVVSDP PGQCVASYNV TFAVGNAPGG TVVVNYTWHL
ASGRLVPEGP VTLKSNSSQG FGIRETSNGT PKGSVVFVTW TTASSSGTSN SAPVSITCLK