Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0419 |
Symbol | |
ID | 8331746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 469477 |
End bp | 470052 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953585 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003111212 |
Protein GI | 256389648 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.829788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGGAGT TCACCGAGTT CGCGCAGGCG CGCCAAGCGC ACATGCGGCG GATGGCGTTC CTGTTGTGCG GGAACTGGCA TGACGCGCAG GACGTCACCC AGATCGCGCT GATGAACCTG TGCCGGGCGT GGAGCCGGGC GCGGCGGGCG GACTCCATCG ACGCCTACGC GCATCGCGTC GTCGTCCGCG CCTATCTTAG TCAGCGCAAG AAGGTGCTGC GGCAGCAGGC ACGCGCTGTG GAGTACGCGC GCGCCTCCGA GCGTGTGCCG GGTTCGGCTG AGGAGTCGGG GGAGCCCGAG CTGCGGATGG CGCTGCTCGC CGCGCTGGCC CAGCTTCCGC CGCGCGGGCG GGCGGTCGTG GTTCTCCGGT TCTGGGAGGA CCTGAGCATC GAGGCGACCG CTGAGGCGCT CGGGTGCTCG ACCGGGAATG TGAAGAGCCA GGCCTCGCGG TCGTTGGCCA AGCTGCGGGA GATCCTCGGC GACTCGCTGT TCGACGAGGG CGACGGGGGC GGGCCTCGTC GCGCGCATGT GCACGCCGGG GTGCGTCCGG TGTGGGAAGT GGATGGCCGA GCATGA
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Protein sequence | MPEFTEFAQA RQAHMRRMAF LLCGNWHDAQ DVTQIALMNL CRAWSRARRA DSIDAYAHRV VVRAYLSQRK KVLRQQARAV EYARASERVP GSAEESGEPE LRMALLAALA QLPPRGRAVV VLRFWEDLSI EATAEALGCS TGNVKSQASR SLAKLREILG DSLFDEGDGG GPRRAHVHAG VRPVWEVDGR A
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