Gene Caci_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0418 
Symbol 
ID8331745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp468043 
End bp469284 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content73% 
IMG OID644953584 
Productprotease-like protein 
Protein accessionYP_003111211 
Protein GI256389647 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4934] Predicted protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.971543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGTACCA ACCTGCGCCC GGCCCACCGT CGTGCCGCGA TATCCCTGGC CGCGGCAGCG 
GTTCTGGGTA TCACCGCCGC AGCCGTGGCC ACCTCCGCCA ACGCCGCCGG AGCCCCCGCC
GCCAAGTCCG CCGGACCCGC GTGGTCCCGG GCCTGCGACG CCCCCGCGCC CGGCATGGCC
GCTTGCGACG CGCTGCACGT CACCAACGTT CCGGAGCACA TCCGGGCACT CGGCGTGACC
CCGAACGCCA CCCCCTCCGG CTTCGGTCCC GCCGACCTGC GCTCGGCCTA CAAGCTGCCC
GCCAACGGCG GCGCCGGCCA GACCGTCGCG ATCGTGGACG CCTACAACGA CCCGAACGCC
GCCGCGGACA TGGCCACCTA CCGCAGCCAG TTCGGCCTGC CGGCGTGCAC CGTGGCCTCC
GGCTGCTTCA AGCAGGTCAG CCAGACCGGC ACCAGCACCC TGCCGGCGAA CAACACCGGC
TGGGCCGGGG AGATCTCGCT GGACCTGGAC ATGGTCTCGG CGGTCGCGCC CAACGCGCAC
ATCATCCTGG TCGAGGCCAA GACCGCCTCG ATGGCCAACC TCGGCACCGC GGTCAACGAG
GCGGTGAAAC TCGGCGCGAA GTTCGTCTCC AACAGCTACG GCGGCGGCGA GTCCAGCGCC
GACACCGGCT ATGACACCAA GTACTTCCAG CACTCCGGCG TCGCCATCAC CGCCTCCTCC
GGCGACGGCG GCTACGGCGT GGAGTACCCG GCGGCCTCGC CCTACGTCAC CGCCGTCGGC
GGCACCGCGC TGAAGAAGGA CAGCTCGGCG CGCGGCTGGA GCGAGTCGGT GTGGTCCACC
AACTCCACCG AGGGCGCCGG CTCCGGCTGC TCGGCGTACG AGCCGAAGCC CACCTGGCAG
AAGGACACCG GCTGCAGCAA GCGCACCGTC GCGGACGTCT CCGCGGTCGC CGACCCGGCC
ACCGGCGTCG CGGTCTACCA GACCTACGGT GGCAGCGGCT GGGCAGTCTA CGGCGGCACC
TCCGTCGCCT CCCCGCTGAT CGCCGCCGTC TACGCCGACG CCGGCACCCC GAAGGCGTCC
GTCCCGGCCG CGAACATCTA CAGCCACACC TCCGCGCTGA ACGACGTCAC CACCGGCAAG
ACGGCGACCT GCACGCCGAA GTACCTGTGC ACCGCCGGCA CCGGCTTCGA CGGCCCGACC
GGCTGGGGCA CGCCGAACGG CCTGGCCGCC TTCACCGGCT GA
 
Protein sequence
MRTNLRPAHR RAAISLAAAA VLGITAAAVA TSANAAGAPA AKSAGPAWSR ACDAPAPGMA 
ACDALHVTNV PEHIRALGVT PNATPSGFGP ADLRSAYKLP ANGGAGQTVA IVDAYNDPNA
AADMATYRSQ FGLPACTVAS GCFKQVSQTG TSTLPANNTG WAGEISLDLD MVSAVAPNAH
IILVEAKTAS MANLGTAVNE AVKLGAKFVS NSYGGGESSA DTGYDTKYFQ HSGVAITASS
GDGGYGVEYP AASPYVTAVG GTALKKDSSA RGWSESVWST NSTEGAGSGC SAYEPKPTWQ
KDTGCSKRTV ADVSAVADPA TGVAVYQTYG GSGWAVYGGT SVASPLIAAV YADAGTPKAS
VPAANIYSHT SALNDVTTGK TATCTPKYLC TAGTGFDGPT GWGTPNGLAA FTG