| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0412 |
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| Symbol | |
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| ID | 8331739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 459406 |
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| End bp | 460905 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644953578 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003111205 |
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| Protein GI | 256389641 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.758903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCACC TGCAAACGAC CAGCCTCGGC CCGAACGCCG CGCACGACCC GCACGACCCG
CACGGCGAGC ACGCCCCTCA GCACGCCCGC CGCTGGTGGA TCCTCGCGGT AATCTGCCTG
GCCCAGCTCA TGGACGTCCT GGACGTCACC ATCGTCAACA TCGCCCTGCC CGACGCCCAG
AAGAGCCTCG ACTTCTCGGT CGGCGACCGG CAGTGGATCG TCACCGCCTA CTCCCTCGCC
TTCGGCAGCC TGCTGCTGTT CTCCGGCCGC GTCTCCGACC TCGTCGGACG GCGCCGGATG
TTCCTGGTCG GGCTCGTCGC CTTCGCCGCA GCCTCCGCGC TCGGCGGTGC GGCACCGGAC
TTCGGCGTCC TCGTCACCGC GCGCGCCGTC CAAGGCGCCG CCGGCGCGAT GCTCGCTCCC
GCCGCGCTCT CCCTGCTGAG CACCACGTTC ACCGAGCCCA AGGAGCGCGC CAAGGCGTTC
GCCGTGTTCG GCGGCGTCTC CGGCTCCGGC GCCGCGATCG GCATGCTGCT CGGCGGCGTG
CTGACCGAGT TCCTGAACTG GCGCTTCACG CTGTACGTGA ACGTCGCCAT CGCCGTCGTA
GCGTTCATCG GCGCCGCCAC GCTGATCCAG CGCCGGAACG AAACTCAATC CGAGATCGGC
GAGCGCCCGA AGCTCGACCT CCCCGGCACG ATCCTCGTCT CCGCCGCACT GTTCGGCATC
GTCTATGGCT TCGCCGACGT CGAGTCGCAC GCGTGGACCG CGCCGAGCAC CTGGGTGTCC
CTGACCTCCG GCGTCGTCCT ACTCGGCGTC TTCGCCTGGT GGCAAAGACA GGCCGCGAAT
CCCTTGCTGC CACTGCGGAT CGTCCTCGAC CGCACCCGCG GCGGCTCGAT CCTCGCGATC
TTCCTGGGCA GCATCGGCCT GTTCGGCGCC TTCCTGTTCC TCAACTTCTA CCTCCAAGGC
GTGCTGCACT ACTCGCCGCT CATGACCGGC GTCGCGTTCC TGCCGATGGT CGTCACGCTC
GTGATCGCCG GAGGCATATG CACCACGCAG CTCTACCCGA GGTTCGGCGC GAAGCTCCCG
GTGACCGCCG GCATGCTCAT CGCCGCCGCT GCCATGGTCT TGCTCACCGA CATCGGTCCG
CACAGCACGT ACGCGGGCAC CGTCCTCGGT CCGCTCCTGG TGTTCGGGCT CGGCATCGGC
GCCACGATCG CCCCGGCGAT GAGCGCCGGT ACCGCCGACG TCGAACCGCG TGACGCGGGC
ATCGCCTCGG CGACCGTCAA CACCGCTCAG CAGATCGGCG GCTCGATCGG CACCGCGCTG
TTGAACTCCC TCGCCGCCTC AGCGCTGGGC AGATATCTGG TCGGCAAGGA CGCCGCCAGC
CATGCCGTGC AGACCGACGC CGCGATCCAC AGCTATAGCG TCGCGTTCTG GGCGACCGGC
GCGATCTTCG CCGGCGGCGC GGTCGTCTGT GGACTCGTGC TGCGACGTGG TAAGCCATAA
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| Protein sequence | MSHLQTTSLG PNAAHDPHDP HGEHAPQHAR RWWILAVICL AQLMDVLDVT IVNIALPDAQ
KSLDFSVGDR QWIVTAYSLA FGSLLLFSGR VSDLVGRRRM FLVGLVAFAA ASALGGAAPD
FGVLVTARAV QGAAGAMLAP AALSLLSTTF TEPKERAKAF AVFGGVSGSG AAIGMLLGGV
LTEFLNWRFT LYVNVAIAVV AFIGAATLIQ RRNETQSEIG ERPKLDLPGT ILVSAALFGI
VYGFADVESH AWTAPSTWVS LTSGVVLLGV FAWWQRQAAN PLLPLRIVLD RTRGGSILAI
FLGSIGLFGA FLFLNFYLQG VLHYSPLMTG VAFLPMVVTL VIAGGICTTQ LYPRFGAKLP
VTAGMLIAAA AMVLLTDIGP HSTYAGTVLG PLLVFGLGIG ATIAPAMSAG TADVEPRDAG
IASATVNTAQ QIGGSIGTAL LNSLAASALG RYLVGKDAAS HAVQTDAAIH SYSVAFWATG
AIFAGGAVVC GLVLRRGKP
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