Gene Caci_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0398 
Symbol 
ID8331725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp444478 
End bp445764 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content70% 
IMG OID644953564 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003111191 
Protein GI256389627 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.167053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0238108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCACCGG CGATCCGGCA GACCGACCAC CTGTTCACGG TTCCGCTGCA CCACGACCGT 
CCGCGCGGGG AGCAGATCGA GCTCTACGCC CGCGAGGTCA CCGCGGACGA GACGCTCCCG
TGGCTGGTCT TCCTCCAGGG CGGGCCCGGC CACCGGTCGC CCCGCCCGCT CCCCGCGGCG
CTGGCGACCG GCTGGCTCAG CCGCGCCCTG CAGGACTACC GCGTGCTGCT GCTCGACCAG
CGCGGCACCG GCCGCTCAAC CCCGGCGACG CGGCAGACCC TGCCGAGCCG GGGCGACGCG
CGGCGCCAGG CCGAGTACCT CACCGCCTTC CGCGCCGACT CGATCGTCCG CGACGCCGAG
CTCGTCCGGC GGCAGCTGAC CGGCGGCGCT CCGTGGAGCG TGCTGGGGCA GAGCTTCGGC
GGATTCTGCA CGATCAGCTA TTTGTCGGAC GCGCCCGAAG GCCTCGCAGA GGTCTTCATC
ACCGGCGGCG TGCCGACGTT GGAGGGCGAC GCCGACGACG TCTACCGTGC TGCCTATCCG
CGCATGGAAG ACAAGAACGC GCTGCTCTAC CACCGCTATC CCCAGGATGT GGATATCGCG
CGCTCGATCG CCGAGTTCCT GCGGGAGCAC GAAACCGTGC TGCCCGACGG GACGCTGCTG
ACGGTCGAGG CGTTCCAGTC GCTCGGCATC ATGCTCGGCG CGACCGACGG TGTGGACCGT
CTGCACTACC TCCTGGAGGA CCCCTTCTGC CAGACGGCGC ACCGGACGGA GCTGTCCGAC
CGGTTCCAGT GGCAGGTCCA GGCCGCACTG TCCTTCGCCG AGCGGCCGCT CTACGCGCTC
CTGCACGAGG CGATCTACGC GCAGGGTTCC GGACCCACCG CGTGGGCTGC CAGCCGCGTT
CGCAAACAGT TCCCGCGCTT CGACGCCGAG CGCGTTCTGT CGGAGACGGG AACACCGCTG
CTGTTCACGG GCGAGACCAT TCACCCCTGG CACTTCCGGA CCGACCCGGC GCTGCGGCCG
CTGCGCGCGG TGGCCGATCT GCTTGCCGGC TATGAGGATT GGCGCCCTTT GTACGACACG
TCCGTGCTGG CGGCGAATAC CGTGCCGACC TTCGCGACTG TCTATACCGA CGACCTGTAC
GTCGATCCCA AGCAGTCGCT GACCACCGCC GACGCCATCC GGGCTCTGAC GGTTCACGTC
TCGGACGACC ACGAGCACGA CGGCCTCACC GCAAGCGGCA CCGACGTGCT CGACCACCTG
CTGGGTATGG CGCGCGACGC GCGCTGA
 
Protein sequence
MPPAIRQTDH LFTVPLHHDR PRGEQIELYA REVTADETLP WLVFLQGGPG HRSPRPLPAA 
LATGWLSRAL QDYRVLLLDQ RGTGRSTPAT RQTLPSRGDA RRQAEYLTAF RADSIVRDAE
LVRRQLTGGA PWSVLGQSFG GFCTISYLSD APEGLAEVFI TGGVPTLEGD ADDVYRAAYP
RMEDKNALLY HRYPQDVDIA RSIAEFLREH ETVLPDGTLL TVEAFQSLGI MLGATDGVDR
LHYLLEDPFC QTAHRTELSD RFQWQVQAAL SFAERPLYAL LHEAIYAQGS GPTAWAASRV
RKQFPRFDAE RVLSETGTPL LFTGETIHPW HFRTDPALRP LRAVADLLAG YEDWRPLYDT
SVLAANTVPT FATVYTDDLY VDPKQSLTTA DAIRALTVHV SDDHEHDGLT ASGTDVLDHL
LGMARDAR