Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0397 |
Symbol | |
ID | 8331724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 442903 |
End bp | 444330 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644953563 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_003111190 |
Protein GI | 256389626 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.264481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0251152 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTGT CCGGCGACGG TCAGCAGACG CAGGGCCAGA TCGGGGCGCG GCTGCAGGAG GTGCGCACGC GGCGCGGCCT GACGCAGCGC GCTTTGGCAG AGCCCGGATA CACCGCGGCG TACGTCTCCA CGCTGGAGGC CGGCAAGGCG CGCGCGTCGG AGGCGGCGCT GCGTTACTTC GCCGAGCGGC TCGCGATCAG CTACGAGGAG CTGGCGACCG GCGTTCCGGC GGGGCTGCGT GCGGAGATCC GCGACGGGCT GGCCGAGGCG AACGCGGCGA TGGACGCGGG GCGCGCGGCG GAGGCCGAGG CGTTGTTGGC GGCGCTGCTG GAGCGGGCGG CGGGCAACGA CGTGCCGGAT CTGGCGGCGG ATGTGCGCGT CGCGCTCGGG GCGTTCCTGC TGCGCCGGGG CGATCTGGCC GCCGGGCGCG AGCAGTTCGA GCAAGCCGAG GCGCTGCTCG CCGATCGGCC GCTGGTGGCA CGAGTGCGCG CGATTCGCGG TCGGGCGACG GCGTACTACC TGGAGGGCGA CGTCCGCTAC TCCTGCTATC TGCTCGAGAA CACCATCAGC GAGCTGAACG GCGGCGGGCT GCCGGATCCG GCGTCGCTGG TGCTGCTGTA CGCGGCGGTC ATCGGGCCGT ATCTGGAACT CGGCGCGTTG GAGCGCGCCA CGAAGGCGGC GACGCTCGCC CTGGACCTGG CACCGCGCGT CGCCGATCCG ATCGCCGTGG CCACCCTGCA CCGCTCGGTC GCCCGCACCC TGGCCGCCGG CGGACGCTTC GACGAAGCCG AGGCCGCGCT GGTGAAGGCG CAGGACGTCT ACCAGCAATG GGAGATCCGC GCCGAACTGG CGCAATGCCA CTGGATGCGC GGCTACCTCT ACGCCCAACA CGAACGCTTC GCCGACGCCG AAACCGAACT GCGCACCGCC GCGACCATGC TCCGCGCCGC CGACGCGGTG TTCTACGCGG TCCAGGTCGA AGTCGAACTC GCCGACGTCC GCTGGCGCCT CGGCCACACC GACGAAGCCG AGCACCTGCT GACCCGCCTG CTCGCCGACC TCGGCCCAGG CCACGGCGCC GTCCACGCTG CCGCCGCCCA CCGCCTCCTC GGCCTGATCC GCGAACGCGC CGACGACCCC CAAACCGCCG AACGCCACTA CCGCCAAGCG ATCGAACTCC AGCAGGACGC CGACGTCGCA GGCGACCTCG CCGACACCTC CCGCCTCCTC GGCGACCTGC TCGACAAGCA GGGCCGCACC CGCGAGGCGG TGGCGGCCTA CCGGAACGGA CTGACCGCGC TAGCGAGGCC CGGCACGACG ACCCTCGGCG CCGCACCGCT GCCGCCGCCG GTGATCTCGG CACTGGATTC GGTGCATCGG GCGGTGCATG TCGTGCCGGG TGGTGGGGAT TCGGCCGCTC ACGAATAG
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Protein sequence | MPLSGDGQQT QGQIGARLQE VRTRRGLTQR ALAEPGYTAA YVSTLEAGKA RASEAALRYF AERLAISYEE LATGVPAGLR AEIRDGLAEA NAAMDAGRAA EAEALLAALL ERAAGNDVPD LAADVRVALG AFLLRRGDLA AGREQFEQAE ALLADRPLVA RVRAIRGRAT AYYLEGDVRY SCYLLENTIS ELNGGGLPDP ASLVLLYAAV IGPYLELGAL ERATKAATLA LDLAPRVADP IAVATLHRSV ARTLAAGGRF DEAEAALVKA QDVYQQWEIR AELAQCHWMR GYLYAQHERF ADAETELRTA ATMLRAADAV FYAVQVEVEL ADVRWRLGHT DEAEHLLTRL LADLGPGHGA VHAAAAHRLL GLIRERADDP QTAERHYRQA IELQQDADVA GDLADTSRLL GDLLDKQGRT REAVAAYRNG LTALARPGTT TLGAAPLPPP VISALDSVHR AVHVVPGGGD SAAHE
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