Gene Caci_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0396 
Symbol 
ID8331723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp442044 
End bp442469 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content67% 
IMG OID644953562 
Productprotein of unknown function DUF336 
Protein accessionYP_003111189 
Protein GI256389625 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.296398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0672485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTATCA GCTTGGTGCA GGCCGAGGCT GTTGTCGCTG CTGCGCGGGT CGGGGCCGAT 
GAGCGGGGTG TGGCCGTGGC GTTCGCGGTG GTGGACGCGG GTGGGAACCT TGTTGCGTTC
GCTCGGGGTG ATGGGGCGAA TCTCATCACC GTCGACACCG CGATCGGGAA GGCTTTCACC
GCGATCAGTA TCGGTGCTGA CAGCATCAAT CTGACCGCGG CCATTCAGCC CGGTGGGCCG
TTGTTCGGGA CCGGGTTGGT GCTGGCTGGG GCGCGGTCGT TCGTTCCTTA TGGCGGCGGC
GTGCTTATTC GGGTCGATGG ACGGGTGGTG GGTGCGCTGG GGATCGCCGG GGCGGCGAGT
TCCGAGGTTG ATCACGAGAT CGCTGCTGCG GCTGCCGTGC AGGTTCCGGT GCGGGTCGCG
GCGTAG
 
Protein sequence
MSISLVQAEA VVAAARVGAD ERGVAVAFAV VDAGGNLVAF ARGDGANLIT VDTAIGKAFT 
AISIGADSIN LTAAIQPGGP LFGTGLVLAG ARSFVPYGGG VLIRVDGRVV GALGIAGAAS
SEVDHEIAAA AAVQVPVRVA A