| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0394 |
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| Symbol | |
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| ID | 8331721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 439714 |
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| End bp | 441039 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644953560 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_003111187 |
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| Protein GI | 256389623 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.122831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAC GGAGTTGTCA GGTCTGCGGT GCCGCACTGT CGGATCGCGG ACGCGGCCGG
ACCTCCGTCT ACTGCTCGGC AGCGTGCCGC CAACGCGCCT ACCGCCTCCG GCACACCACC
GCCGACCAGA GCGCCGCCGA CGTCCTCGCC GAGATCGAGC GCCAGGTCAG GACGCTCGCG
TTGCGCCCTC CGCAGTCCTT CCGCACCGAC GCCGACGCGC TGGCGACGAC CGTGCGCAGG
TTGCGGCGCC TGGCCCAAAA CGTCACACCG GAACCAGTGA CGAAATCAGC CGCCGAGGAA
CAGCCGCCCC AGCTCGCCGG CGAACCCGGC TTCGCAGCCC TCGTCGAACC CCACCGCAAG
TGGCTCCACC TGCACTGCTA CCGCATGGCC GGCTCCTACG ACGACGCCGA GGACCTGGTC
CAGGAGACCC TCCTCAAAGC CTGGCGCGAC CGATCCGGCT TCGAGGGCAG GGCAGCGGCG
CGGACCTGGC TGTACCGTAT CGCCACCAAC GTCTGCATCG ACCACCTGCG CCGGACCGGC
CGCCGTCCGC AGCGCTACGA GAGCACTGCC ACCTCCGGCG CCGCCGAGCC GCCGGAACGC
ATGGCCTGGC TCCAGCCCTA CCCCGACCAG CTGCTCGACG AGGCGGTCGC AGAGGACGAA
CACCCCGAGG CGGCCGCGGT CTCGCGCGAG ACCATGGAAC TGGTCTTCCT CGCCACGCTC
CAGCACCTGC CGCCCAGGCA GCGCGCAGTG TTGATCTTCC GCGACGTGCT GGGCCGCCCG
GCGGAGGAGA CCGCGACGCT GATGGACATG AGCGTCGCCG CCGCCAACAG CGCGTTGCAG
CGCGCCCGGC AGACGCTGCG CGAACGCCTG CCGCAGCGGC GCACCGACTG GACACGCGGG
GACCACAGCC GGCAGGAACA GGAGATCGTG CGCCGCTACA TGGCCGCCGC CGAACGCTCC
GACGTCTCGA TGATGGCCGA CCTGCTCAGC GCCGACGTGC TGGTCACGAT GCCGCCGAAC
CCGGTGTGGT TCGCCGGGCG GGACGCGCTG CTCACCCAGA TCGGACCCCT GTTCGACCGC
ACGTCGCCGG GCTACTTCGG GCGCTGGCGG CATCTGCCGG TCGGCGCGAA CCGGCTGCCG
GCGGTCGCCG GATACGTGCA GCGACCAGGC ACGTCGGTGT TCCGGGCGCA GATGGTCGAC
GTGCTGCGCA TCGAAGCGGG GCAGATCATG GAGATCACCA CGTTCGAGGC GCATCTGGTC
GCCGCGTTCG GTCTGCCGCT GACGCTGCCG ATGACGGATC GCCCCGGCGC GCGTCCAACT
CTTTGA
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| Protein sequence | MKARSCQVCG AALSDRGRGR TSVYCSAACR QRAYRLRHTT ADQSAADVLA EIERQVRTLA
LRPPQSFRTD ADALATTVRR LRRLAQNVTP EPVTKSAAEE QPPQLAGEPG FAALVEPHRK
WLHLHCYRMA GSYDDAEDLV QETLLKAWRD RSGFEGRAAA RTWLYRIATN VCIDHLRRTG
RRPQRYESTA TSGAAEPPER MAWLQPYPDQ LLDEAVAEDE HPEAAAVSRE TMELVFLATL
QHLPPRQRAV LIFRDVLGRP AEETATLMDM SVAAANSALQ RARQTLRERL PQRRTDWTRG
DHSRQEQEIV RRYMAAAERS DVSMMADLLS ADVLVTMPPN PVWFAGRDAL LTQIGPLFDR
TSPGYFGRWR HLPVGANRLP AVAGYVQRPG TSVFRAQMVD VLRIEAGQIM EITTFEAHLV
AAFGLPLTLP MTDRPGARPT L
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