Gene Caci_0389 details

Gene Information

• Locus tag: Caci_0389
• ID: 8331716
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Catenulispora acidiphila DSM 44928
• Kingdom: Bacteria
• Replicon accession: NC_013131
• Strand: +
• Start bp: 431849
• End bp: 435232
• Gene Length: 3384 bp
• Protein Length: 1127 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644953555
• Product: WGR domain-containing protein
• Protein accession: YP_003111182
• Protein GI: 256389618

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.489109
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 0.333615
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGGCG CCACCAACGC ACCCACCGCA GTGTCGGAAG ACACGTGCCA GATCCCCGGG 
GCGATGCGCC GCCTCGTGAT TCCCCGCCGG GGCGATGTTC CGAGCGAACC GGTCGCCGTC 
GATCCGAAAG CCGCCGCGTA TTACGCCGCA TGGTTTGACG AGCAGAGCCC GATCGTCGCC 
GGGATCGTCG ACCACGGACA CAGCGAAGCC GATCTCGTCG AGGAGTACCG AGCTTCCAAG 
GGCGACCTCG TCATAGCCAC GCCGCTTGCC GCAGCGGTCG CGGCGGCGAT GACGATCTCG 
CAGAGCACGC CGGCGTACGA GAACCCCGCC GGCATCGTCG ATGCCTGGAT CGCCACGCGC 
GGTCTCGCAT TCGCCGCGGC CGCCGCTGTC GAGCTGTTCG GCGTGAAGAC CTCGGGCCGC 
ACCTCCAAGG GAGAGCAAGC TTCAGCGTGG CTCTGCCGCA AGGACGGCGC CTATGAAGAC 
ATACCTCATG GAATCGCCGT CCGCGTGCGC CAGCACCTGG CATCGGCGGG GGAGCAGGAC 
TACGCGGAGG TCGCCGATGT CCTTGCGCGC TACCGGCTAT CGCTGGCGTC CCCGACGACC 
TCCGGTCAAG TGCTGTCGCG CATGCTCACG TCCTTCCTGA CGCCGGAGAA CGTCGACTGG 
GTCGAGAGCG ACTTCGCGTT CGTCTCGCGG GCGCATTACT CCGCGTGGCT CGCGCTCGCC 
TCGATCACGA CCGAGGAGCA AGTAGCCGCC TTGCCGGCGC AGAAGATCTC GGCGTGGGGC 
ATCGCCCGAG AGCTCAGTGC GCTGTGGACC GCGCTCGACA ACGTCGGCGT CCATCTCCTC 
CCGGTCCTGA CCGGATGGCT CGCTCCCGAG TCGGACCCGG AAAGCGTTCA GCGCCTGCTG 
TCCATCGTCG CGGGCATCGC GTCCGCAGAC GCCTTCCGCT ACCTCGTCGA CAACATCGAC 
AAGAAGTACT TCACGGTTGC GACGCAGAAC GCTGCCACCA CCTTTCCCCG GCGCGCTCTC 
CAGATCCTCG GCGACGCCGC GCTCCGCGAC ACTCCGCGCG GGCTGGCTGC CGCCAACGTG 
CTGCGCTTGC ACATCGTCGC GCACGACGAA CTCGTGCAGG ACGAGCTGGC GAACCTCACT 
CCGGCGGTAC GGGATCACGT CGAGAAGATC CGCGCCGCCA ACGTCCCCGT GCCCGACGCC 
GAGACAGACA GCCTGCCGAC GCTGTTCGTC AGCCCGCCGT GGCTGACCGC CGTGAAGCCG 
GCCAGGCCGG TCGTCATCAC CGGTCTGGAG GCGCCGACCG AGACGGTCTT GGCGTGGCGC 
GACGGCGAAA AAGAGCAGTG GGCTTCCGCC GAGCTCATCA CGAATCCCCA GTGGAAACTC 
GAAAGCTGGA AGGACATCGC CGACCGCATC AGCACCGGTG GCTCGGCCGG CTGGTACGCG 
AACGGCCACT TCGCCGTCGA GGCTCCCGAG GATCTGGTCC GGTCGGTTCT CACCAGCTGG 
GAGCCCGACT CCTGGCAGTC CGACACCTGG ATCCCAACGC TGGTAATGCG TTTCGGCGCC 
GACGCGCTGC CGCCGATCCT GAGCTTGGCA CGCAGCGTAC CGGCGTCGGG TGCCGTTTTC 
CTCGCCCCGT TCGAGGCTCC CGAGGTCGCC CTCCTCGCGG CCGACTGGCT CAGCCGGCTG 
AAGACCGCGC GACCGTTCGC GCTGGCTTGG CTGACGCGGC ATCCCGGCTT CGCAGCCAGG 
ACCCTGATAC CGGCGGCGCT CGGCAAGGCG GGCAAGGCGC GCAGTGCCGC CGAGCTGACC 
ATCCGCACAC TGGCCGCACG CGGATTCACT GCCGAGATCA CCGAAGCCGC CGCAGGGTAC 
GGCGACGCCG TGGCGCAGGC GGTCGCCGCC ATCGTCGCCG ACGACGGCAC GCTCACGCTG 
CCCAAGACGA TGCCCGCCGT CCCGGACTGG GCCGAAACCC GGCTGCTGCC GCAGATCCTG 
CTCAAGGGAC GGCAGACCGC GTTGCCCGAG CAGTCTGTGA AGCACCTGCT CCTGATGCTC 
GCGGTGTCCA AAGGTACCGA GCCCTACGCC GGAATCCAGA TGGCGAAGGG CATCTGCGAC 
CCGGCCTCGC TCGCCACGTT CTCGTGGGCG TTGTTCGAGA ACTGGCGCGG TGTCGACTAC 
CCGGCGAAGG AGAGCTGGGC GTTCGACGCG CTGCGGTGGT TCGGCGACGA CGAGACGGTG 
CGGCGGCTGT CCCCGATGAT CCGCCTGTGG CCCGGCGAGA ACGGGCATCA GCGCGCGGTC 
GCCGGTCTGG ACGTACTGGC CGACATCGGC GGAACCGTGG CGCTGATGCA CCTCTACGGC 
ATCTCGCAGA AGGTCAAGTT CAAGGGGTTG AAGGAGCAGG CGACGCAGCG CGTCACGGAG 
ATCGCCGACG ACCTCGGGCT CACCGCCGAG CAGTTGGGGG ACCGTCTCGT CCCGGACCTC 
GGGTTGGCGT CCTCCGGGAC GCTGTCCCTG GACTACGGTC CACGGTCGTT CACTGTCGGA 
TTCGACGAAC AGCTGAAGCC GTATGTCGCC GATCAGAGCG GCAAGCGTCT CAAGGCTCTG 
CCGAAGCCGG GAGCGAAGGA CGATCAGGAG CTCGCACCCG CTGCCCACCA GCAGTTCTCC 
GCGCTGAAGA AGGACGTGCG GACGCTCGCC GCGAGCCAGA TCGCGCGCTT CGAGCTCGCC 
ATGGTGACGC AGCGCCGCTG GACGTCCCAG GAGTTCGGCG AGTACTTCGT CGGGCATCCC 
TTGCTGCGAC ACCTGGTCCG GCGCCTGGTC TGGGTGACCT TCGTCGATGA GAAGGTAGGC 
AGCGCCTTCC GGGTCGCCGA AGACCTGAGT CTCGCCGACA TCGCAGATGA CGAATTCACC 
CTCGCCGACG ACGCGGTGAT CGGCGTCGCG CATCCGCTGC ACATCGGCGG GGACGTCGCC 
GCGTGGTCGG ACGTGTTCGC CGACTACGAG ATCCTTCAGC CGTTCGCGCA ATTGGGACGC 
ACTGTGTTCG CATTCACCGA CGCGGAGAAG GCTTCGACGC GCCTGACCCG GTTCGGCGGC 
ATCGAGACTC CCGTCGGCAA AGTCCTGGGA CTCGAACGGC GCGGCTGGCG CCGGGGTGCT 
CCGCAGGACG CCGGCATCCA GGGCTGGATA TCACGCGCGC TCCTCGGCGG GGGTTCGGTC 
ACCGCGACCC TCGACCCCGG CATCACCGTC GACTACGTCG CCGAGTGGGG CGAGACGCAG 
CGTCTCCAGG AGGTCTTCAT CAGCCGCCAC GCCGACGGCG AGAGCTACTG GAACGCCTCG 
GCGAAGTTCC GCGAGCTCGG CAGCCTAGAC GAGATCACGG CCTCCGAACT CCTCCGCGAC 
CTGACCGAGG CGACGACCCA GTGA 

 

Protein sequence

MSGATNAPTA VSEDTCQIPG AMRRLVIPRR GDVPSEPVAV DPKAAAYYAA WFDEQSPIVA 
GIVDHGHSEA DLVEEYRASK GDLVIATPLA AAVAAAMTIS QSTPAYENPA GIVDAWIATR 
GLAFAAAAAV ELFGVKTSGR TSKGEQASAW LCRKDGAYED IPHGIAVRVR QHLASAGEQD 
YAEVADVLAR YRLSLASPTT SGQVLSRMLT SFLTPENVDW VESDFAFVSR AHYSAWLALA 
SITTEEQVAA LPAQKISAWG IARELSALWT ALDNVGVHLL PVLTGWLAPE SDPESVQRLL 
SIVAGIASAD AFRYLVDNID KKYFTVATQN AATTFPRRAL QILGDAALRD TPRGLAAANV 
LRLHIVAHDE LVQDELANLT PAVRDHVEKI RAANVPVPDA ETDSLPTLFV SPPWLTAVKP 
ARPVVITGLE APTETVLAWR DGEKEQWASA ELITNPQWKL ESWKDIADRI STGGSAGWYA 
NGHFAVEAPE DLVRSVLTSW EPDSWQSDTW IPTLVMRFGA DALPPILSLA RSVPASGAVF 
LAPFEAPEVA LLAADWLSRL KTARPFALAW LTRHPGFAAR TLIPAALGKA GKARSAAELT 
IRTLAARGFT AEITEAAAGY GDAVAQAVAA IVADDGTLTL PKTMPAVPDW AETRLLPQIL 
LKGRQTALPE QSVKHLLLML AVSKGTEPYA GIQMAKGICD PASLATFSWA LFENWRGVDY 
PAKESWAFDA LRWFGDDETV RRLSPMIRLW PGENGHQRAV AGLDVLADIG GTVALMHLYG 
ISQKVKFKGL KEQATQRVTE IADDLGLTAE QLGDRLVPDL GLASSGTLSL DYGPRSFTVG 
FDEQLKPYVA DQSGKRLKAL PKPGAKDDQE LAPAAHQQFS ALKKDVRTLA ASQIARFELA 
MVTQRRWTSQ EFGEYFVGHP LLRHLVRRLV WVTFVDEKVG SAFRVAEDLS LADIADDEFT 
LADDAVIGVA HPLHIGGDVA AWSDVFADYE ILQPFAQLGR TVFAFTDAEK ASTRLTRFGG 
IETPVGKVLG LERRGWRRGA PQDAGIQGWI SRALLGGGSV TATLDPGITV DYVAEWGETQ 
RLQEVFISRH ADGESYWNAS AKFRELGSLD EITASELLRD LTEATTQ