| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0385 |
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| Symbol | sdhA |
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| ID | 8331712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 427387 |
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| End bp | 429336 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644953552 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_003111179 |
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| Protein GI | 256389615 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.342601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.770498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGATT ACACGGATTA CACCGTCGGC GACCCGATCG CCGACGCCAA GGCTCCGGCC
GGACCGATCA GCGAACGCTG GGACACCCGC CGCTTCGAGG CCAAGCTGGT CAACCCGGCG
AACCGGCGCA AGCGCACGGT GATCGTCATC GGCACCGGCC TGGCCGGCGG ATCCGCCGGA
GCGACGCTGG CCGAGGCGGG CTACCACGTC GTGCAGTTCT GCTTCCAGGA CTCGCCGCGG
CGCGCGCACT CGATCGCCGC ACAGGGCGGG ATCAACGCCG CGAAGAACTA CCGCAACGAC
GGCGACTCGG TGCACCGGTT GTTCTACGAC ACCGTCAAGG GCGGCGACTT CCGGTCGCGC
GAGTCGAACG TGCACCGGCT GGCGCAGATC TCCGTGGAGA TCATCGACCA GTGCGTCGCG
CAAGGCGTGC CGTTCGCGCG CGAATACGGC GGGCTGCTCG ACACGCGCTC GTTCGGCGGC
GTGCAGGTCT CCCGTACCTT CTACGCGCGC GGGCAGACGG GGCAACAGCT GCTGCTCGGC
GCGTACCAGG CTATGATGCG GCAGGTCGCC GCCGGCAACA TCGAGCTCCA CGCGCGCACC
GAGATGCTCG ACCTGATCGT CGTCGACGGC CGGGCTCGCG GCATCGTCGC GCGTGACCTT
CTGACCGGCG AGATCTCCAC GTACTTCGGC GACGCGGTCG TCTTGGCGTC CGGCGGTTAC
GGCAACGTCT ACTACCTGTC GACCAACGCC ATGAACTCGA ACGCGACCGC CATCTGGCGC
GCGCATCGTA AGGGTGCTTA CTTCGGAAAC CCCTGCTACA CGCAGATCCA CCCGACCTGC
ATCCCACGCA CCGGCGACCA TCAGTCGAAG CTGACGCTGA TGTCGGAGTC GCTGCGCAAC
GACGGCCGGA TCTGGGTGCC CAAGGCGAAG GGCGATTCGC GGTCTCCCGA CGCGATCCCC
GAGGACGAGC GCGACTACTA CCTGGAGCGT CAGTACCCTT CCTTCGGCAA CCTCGTTCCC
CGCGACATCG CCTCGCGCGC CGCGAAGAAC GTCTGCGACG AGGGTCGCGG CGTCGGACCC
GGCGGGCAGG GCGTGTATCT GGACTTCGCC GACGCCATCA AGCGGCTGGG GCGCAAGGCG
GTCGAGGAGA AGTACGGGAA CCTCTTCGAG ATGTACCAGC GGATCACCGA TGAGGATCCG
TACCGCGTTC CGATGCGTAT CTATCCGGCC GTGCACTACA CGATGGGCGG CCTGTGGGTG
GACTACGACC TGCAGACCAC GGTCCCCGGG CTGTTCGCGG TCGGCGAGGC GAACTTCTCC
GACCACGGCG CCAACCGGCT CGGCGCGTCG GCGCTGATGC AGGGACTGGC CGACGGCTAC
TTCGTGCTCC CGGCGACGAT CAGCGACTAC CTCGCGCGGC ACGCCGGCGA CGTGCCGGTG
ACCGCCGACC ACCCGGAGGC GGTCGCGGCG GTTCGCGAGA CGCAGGAACG GCTGGACGCG
ATCCTCGCGG TCGACGGCGA CCGCACCCCG GACTCCTTCC ACCGCGAACT CGGCGAGCTG
ATGTGGGAGT TGTGCGGCAT GGCGCGCGAC GAGGCCGGGC TGCGCAAGGC GCTGGACCAG
ATCCCGGCGA TCCGTGAGGA GTTCTGGCGC CGGATCAAGG TTCCGGGCAC CGGCGAGGAG
TTCAACCAGT CGCTGGAGAA GGCGAACCGG CTCGTCGACT ACTTCGAGCT CGCCGAGCTG
ATGTGCCTGG ACGCCCTGCA CCGCGGCGAG TCCTGCGGCG GCCACTTCCG CACCGAGTCT
CAGACCCCTG ACGGCGAGGC GGCGCGCAAG GACGAGGAGT TCTCCTACGT CGCCGCCTGG
GAGTACACCG GCCTGGGGCA GGCGCCGGTC CTGCACCGGG AAGAGCTCGA CTTCGAATAC
GTCCACCCTG CTCAACGGAG TTACGCATGA
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| Protein sequence | MTDYTDYTVG DPIADAKAPA GPISERWDTR RFEAKLVNPA NRRKRTVIVI GTGLAGGSAG
ATLAEAGYHV VQFCFQDSPR RAHSIAAQGG INAAKNYRND GDSVHRLFYD TVKGGDFRSR
ESNVHRLAQI SVEIIDQCVA QGVPFAREYG GLLDTRSFGG VQVSRTFYAR GQTGQQLLLG
AYQAMMRQVA AGNIELHART EMLDLIVVDG RARGIVARDL LTGEISTYFG DAVVLASGGY
GNVYYLSTNA MNSNATAIWR AHRKGAYFGN PCYTQIHPTC IPRTGDHQSK LTLMSESLRN
DGRIWVPKAK GDSRSPDAIP EDERDYYLER QYPSFGNLVP RDIASRAAKN VCDEGRGVGP
GGQGVYLDFA DAIKRLGRKA VEEKYGNLFE MYQRITDEDP YRVPMRIYPA VHYTMGGLWV
DYDLQTTVPG LFAVGEANFS DHGANRLGAS ALMQGLADGY FVLPATISDY LARHAGDVPV
TADHPEAVAA VRETQERLDA ILAVDGDRTP DSFHRELGEL MWELCGMARD EAGLRKALDQ
IPAIREEFWR RIKVPGTGEE FNQSLEKANR LVDYFELAEL MCLDALHRGE SCGGHFRTES
QTPDGEAARK DEEFSYVAAW EYTGLGQAPV LHREELDFEY VHPAQRSYA
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