Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0383 |
Symbol | |
ID | 8331710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 425684 |
End bp | 426577 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953550 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003111177 |
Protein GI | 256389613 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.715241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.903063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTCC ACCAGCTCCG ATACTTCATC GCGGTGGCCG AGACGCGCCA CTTCACGCGC GCCGCCGAAG CCCTGCATGT GACGCAGCCC TCACTGTCCC AGCAGATCAG AGCCTTGGAA CACGAACTCG GGGCGGACCT CTTCCTGCGC GCCCGCGGCA ACATCACGCT GACCGACGCC GGCGAGGCCT TGCTTCCGAT GGCCCGGCGC ATCCTCGCGG ACGCCGATGC GGCACGGCGC GAGGTTCAGG AGTTGGCCGA GCTCCGGCGG GGTCACGTGC GGCTCGGGGC GACGCCATCT CTATGTACGG GACTGCTTCC AGACGTCCTT CGGACCTACC ACCGGCGCTA TCCCGGCATC CAGCTGCTGG TCCAGGAGAG CGGTTCGCAC GACCTGGTCC GGGACTTGGC ACGCGGCGCG TTGGACCTGG CCCTGGTCGT GCTGCCGCTG CCGTCCCCGT CGCCGGCGCT CACCACGGAG GAGCTGCTGC GGGAAGATCT GGTCGTCGTC TCGGCGCCGA ACCTCCCGCC GCCCGGCGAC GGCCGGCAGG TGCGCATCGC AGACCTCGAA CACGAGCAGC TGATCATGTT CCGGCACGGC TACGACCTGC GCGACCTGAC CGTGGCGGCG TGCCGCGCGC AGGGTTTCGA GCCGGTCTTC GCGATCGAGG GCGGCGAGAT GGACGCGGTG CTCGGCTTCG CGCGGGCCGG GCTCGGCGTG GCGATCGTGC CGAGCATGGT GGCGCAGAAC GTCGATCCGA GCCTGCGCGT CACGCCGATC GCGCCGCCGG CGCTGCACCG CACCATCGCG CTGGCGCATC GCACCGATGT GGCGCTGCCG CGTGCGGCGC AGGAGTTCCG GCGGACGCTG CTCGAGCGCA CCACAGCAGA GTGA
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Protein sequence | MQFHQLRYFI AVAETRHFTR AAEALHVTQP SLSQQIRALE HELGADLFLR ARGNITLTDA GEALLPMARR ILADADAARR EVQELAELRR GHVRLGATPS LCTGLLPDVL RTYHRRYPGI QLLVQESGSH DLVRDLARGA LDLALVVLPL PSPSPALTTE ELLREDLVVV SAPNLPPPGD GRQVRIADLE HEQLIMFRHG YDLRDLTVAA CRAQGFEPVF AIEGGEMDAV LGFARAGLGV AIVPSMVAQN VDPSLRVTPI APPALHRTIA LAHRTDVALP RAAQEFRRTL LERTTAE
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