Gene Caci_0383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0383 
Symbol 
ID8331710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp425684 
End bp426577 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content71% 
IMG OID644953550 
Producttranscriptional regulator, LysR family 
Protein accessionYP_003111177 
Protein GI256389613 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.715241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.903063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCC ACCAGCTCCG ATACTTCATC GCGGTGGCCG AGACGCGCCA CTTCACGCGC 
GCCGCCGAAG CCCTGCATGT GACGCAGCCC TCACTGTCCC AGCAGATCAG AGCCTTGGAA
CACGAACTCG GGGCGGACCT CTTCCTGCGC GCCCGCGGCA ACATCACGCT GACCGACGCC
GGCGAGGCCT TGCTTCCGAT GGCCCGGCGC ATCCTCGCGG ACGCCGATGC GGCACGGCGC
GAGGTTCAGG AGTTGGCCGA GCTCCGGCGG GGTCACGTGC GGCTCGGGGC GACGCCATCT
CTATGTACGG GACTGCTTCC AGACGTCCTT CGGACCTACC ACCGGCGCTA TCCCGGCATC
CAGCTGCTGG TCCAGGAGAG CGGTTCGCAC GACCTGGTCC GGGACTTGGC ACGCGGCGCG
TTGGACCTGG CCCTGGTCGT GCTGCCGCTG CCGTCCCCGT CGCCGGCGCT CACCACGGAG
GAGCTGCTGC GGGAAGATCT GGTCGTCGTC TCGGCGCCGA ACCTCCCGCC GCCCGGCGAC
GGCCGGCAGG TGCGCATCGC AGACCTCGAA CACGAGCAGC TGATCATGTT CCGGCACGGC
TACGACCTGC GCGACCTGAC CGTGGCGGCG TGCCGCGCGC AGGGTTTCGA GCCGGTCTTC
GCGATCGAGG GCGGCGAGAT GGACGCGGTG CTCGGCTTCG CGCGGGCCGG GCTCGGCGTG
GCGATCGTGC CGAGCATGGT GGCGCAGAAC GTCGATCCGA GCCTGCGCGT CACGCCGATC
GCGCCGCCGG CGCTGCACCG CACCATCGCG CTGGCGCATC GCACCGATGT GGCGCTGCCG
CGTGCGGCGC AGGAGTTCCG GCGGACGCTG CTCGAGCGCA CCACAGCAGA GTGA
 
Protein sequence
MQFHQLRYFI AVAETRHFTR AAEALHVTQP SLSQQIRALE HELGADLFLR ARGNITLTDA 
GEALLPMARR ILADADAARR EVQELAELRR GHVRLGATPS LCTGLLPDVL RTYHRRYPGI
QLLVQESGSH DLVRDLARGA LDLALVVLPL PSPSPALTTE ELLREDLVVV SAPNLPPPGD
GRQVRIADLE HEQLIMFRHG YDLRDLTVAA CRAQGFEPVF AIEGGEMDAV LGFARAGLGV
AIVPSMVAQN VDPSLRVTPI APPALHRTIA LAHRTDVALP RAAQEFRRTL LERTTAE