| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0379 |
|---|
| Symbol | |
|---|
| ID | 8331706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 422561 |
|---|
| End bp | 423196 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644953546 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003111173 |
|---|
| Protein GI | 256389609 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.760291 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTGA TCAAGCACGC CCACGCCTGC GTCTCGCTGG TCGGCGACCA GGGGCGGATC
GTCATCGACC CCGGGACGCT GACCCCCGAC GCGGCCGCGG CGGTGGCCGC CGCCGAAGCG
GTGCTGATCA CCCACGAGCA CTTCGACCAC TTCGACGAGG ACATGCTCGC CAAGGCCCTG
GACGCGCGTC CCGAGCTGCG GGTCTACGGT CCCGCGAGCG TGGTCGGGCG CTGGGAGGCG
CGGCGCGGGC AGGTCACCGC GGTGGCCGCC GGCGACCGGC ACGCCGTGGC GGGGTTCGAC
ATCGCCGTCT TCGGCGAGCT GCACGCGCTG ATCCACCGCG ACGTGCCGCG CGTGACCAAC
GTCGGCTACC TCGTCGATGA GAAGCTCTAC CACCCCGGCG ACGCCTACCA CGTACCCGAG
GCGCCGGTCG AGACGCTGCT GCTGCCCACG AGCGGACCGT GGACGAAGCT CGGCGAGGCG
GTCGACTACG TGCGCGAGGT CGCGCCGAAG CAGGCCGTCC AGATCCACGA ACTGCTGCTC
GCCGAGGTGG GCCAGCAGGC GGCGAAGACC ATGATCGGCA ACCTGACCGA GGCGGCCATG
GCGATCGTCC CGGTCGGCGA GGCGATCACC GTCTGA
|
|---|
| Protein sequence | MQLIKHAHAC VSLVGDQGRI VIDPGTLTPD AAAAVAAAEA VLITHEHFDH FDEDMLAKAL
DARPELRVYG PASVVGRWEA RRGQVTAVAA GDRHAVAGFD IAVFGELHAL IHRDVPRVTN
VGYLVDEKLY HPGDAYHVPE APVETLLLPT SGPWTKLGEA VDYVREVAPK QAVQIHELLL
AEVGQQAAKT MIGNLTEAAM AIVPVGEAIT V
|
|---|
| |