Gene Caci_0368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0368 
Symbol 
ID8331695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp411918 
End bp412919 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content71% 
IMG OID644953535 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_003111162 
Protein GI256389598 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.772942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAGG CCGCAGTCAT CTCAGGAATC GGCTCGAGCG TGCCGGCCTC GGTGGTCACC 
AACGACATGC TCGCCGAGCG GCTGGACACG ACCGACGACT GGATCCGCAG GCTCACCGGC
ATCCAGACCA GGCACTGGAT CGAGCCCGGG CAGGCGACGT CGGATCTGGC GGTGGAAGCC
GGGTCGCGCG CGATCGAATC CGCCGGCGGA GAGCCGCCGC AGGCTGTGGT GTTGGCCACA
ATCACCCCGG ACCGGCCGTG CCCGGCGACC GCTCCGGAGG TCGCCTCGCG CCTGGGCTTG
GAAGGTGTCG CAGCCTTCGA TGTCGCCGCC GTGTGCTCGG GCTTCGTGTA CGGGCTGGCG
ACCGGTACCG GACTGATCGC CGCCGGGATC GCCGAACGCG TCCTGGTGAT CGGCGCGGAC
ACGATCAGCA CGATCCTGGA TCCCACCGAC CGCTCCACGG GCGTCATCTT CGGCGACGGC
GCCGGGGCCG TGATGCTGCG GGCCGGCGAG GCGGACGAGC CGGGCGCGCT GCAGGCGCTG
GATCTGGGCA GCGACGGCAC CGGCACGGAC CTGATCACCG TCCCGGCGGG CGGATCCCGG
CAGCGGTCCA CCAAGTCGGT CCCGCCGACG ACGGACACCT ACCTCAAAAT GGCGGGCCGA
GAGGTGTTCC GCGAGTCGGT CCGGCGCATG GTCGAATCCT GTGAGGCCGT CCTCGAGCGG
ACCGGCTGGG ACGCGGCGGA CGTCGACCGG CTGGTTCCGC ACCAGGCGAA TCTCCGCATC
ATGAACAGTG TGGCGGACCG GCTGGGCATG CCCCGCGACC GCGCGGTCGT CGACCTCGAC
CGCGTCGGCA ACACCTCGGC TGCCTCGATT CCGCTCGCGC TGGCGCGGGC GGCGGCCGAG
GGCACCGTCG AAAGCGGCCA CAGGCTCCTG CTGACCGCCT TCGGCGGCGG CCTGACCTGG
GGGTCGGCCA CGCTGACATG GCCCGACATC AAGCCGGTCT GA
 
Protein sequence
MTKAAVISGI GSSVPASVVT NDMLAERLDT TDDWIRRLTG IQTRHWIEPG QATSDLAVEA 
GSRAIESAGG EPPQAVVLAT ITPDRPCPAT APEVASRLGL EGVAAFDVAA VCSGFVYGLA
TGTGLIAAGI AERVLVIGAD TISTILDPTD RSTGVIFGDG AGAVMLRAGE ADEPGALQAL
DLGSDGTGTD LITVPAGGSR QRSTKSVPPT TDTYLKMAGR EVFRESVRRM VESCEAVLER
TGWDAADVDR LVPHQANLRI MNSVADRLGM PRDRAVVDLD RVGNTSAASI PLALARAAAE
GTVESGHRLL LTAFGGGLTW GSATLTWPDI KPV