Gene Caci_0366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0366 
Symbol 
ID8331693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp410254 
End bp410889 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content68% 
IMG OID644953533 
Productprotein of unknown function ATP binding 
Protein accessionYP_003111160 
Protein GI256389596 
COG category[R] General function prediction only 
COG ID[COG2229] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCTA CAAGCTCTGA CCGCGCCTCC GAGAATCTTC CCGGCGGCCT CAAGCTGCTG 
ATAGCCGGCG GCTTCGGCGT CGGCAAGACC ACGCTGGTCG GGGCGGTCTC CGAGATCGCG
CCGCTGAAGA CCGAGGCGAC GATCACCGAG GCCTCCGTCG GCGTCGACGA CATCGCGCTG
ACCGGCGGCA AGACCACCAC CACGGTCGCG CTGGACTTCG GCCGGATCAG CATCGCCAAC
GAATACGTGC TGTTCCTGTT CGGGATGCCC GGCCAGGAGC GGTTCTGGTT CATGTGGGAC
CAGCTGTGCA TCGGGGCCCT CGGGGTGATC GTGCTGGTCG ACACCCGGCG CATCGAGGAC
TCCTTCGAGG CCGTGGACTA CTTCGAGCGC ACCGGGATCC CGTTCCTGGT CGCGGTCAAC
GAGTTCGAAG GCGCGCGGTT CGCCTACACC TCCGTGGAAG TGCGCGAGGC GCTCCAGCTG
CGCGCCGAGG TGCCGGTGGT GATGTGCGAC GCCCGCTCGC GCACCTCGGC CGTGAACGTG
CTCATCGCGC TGGTGAAGCA CCTGCAGAGC ACCGACTTTC GGCCCGTCCG GCCCGCCGCC
CCCGAGCTGG CCGCGCATGA AGGAAGCTAC ATATGA
 
Protein sequence
MPSTSSDRAS ENLPGGLKLL IAGGFGVGKT TLVGAVSEIA PLKTEATITE ASVGVDDIAL 
TGGKTTTTVA LDFGRISIAN EYVLFLFGMP GQERFWFMWD QLCIGALGVI VLVDTRRIED
SFEAVDYFER TGIPFLVAVN EFEGARFAYT SVEVREALQL RAEVPVVMCD ARSRTSAVNV
LIALVKHLQS TDFRPVRPAA PELAAHEGSY I