Gene Caci_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0342 
Symbol 
ID8331669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp380045 
End bp381613 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content66% 
IMG OID644953509 
Producthypothetical protein 
Protein accessionYP_003111136 
Protein GI256389572 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.258196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCA CGTCGAAGTT CCTGCGCGAT CTGGCCAAGA AGACCAACAC GGCTTCGGCC 
GCGCGCGCCG TCCTGCGGGC CACGCATTTG AAGTCCGGGC CGGGGCGGCT CAGTGATCCG
CGAGTAGGGC TTCCGGCATC CGTTCTCCCG GCCGGTGGGA ACCGCATTAC TGCGGAGAAC
GCTAAGGCGG GTTCTGCGGA CTGGCGCATG GGTGCGAGCA AGTCGCGCCC CGGTACGGAC
TACGAGCGGC AGATCAAGGG CTACGCGTCG ACCGATTCGG TGGCGGCCGG GGAAGCTATC
GACTTCCATA TCGCGGTGGA GCCCGCGGGG TCCTTCACGG TTTCCGTCTA CCGCCTCGGC
TACTACGGCG GCGCCTCGGC TCGCCGCGTC CTGGTGTCGC CGACGCTGAC CGCTGCGCCG
CAGCCGGTAC CGACGCCGGA TCAGGAGACT GGCCGGATCG CCTTGGAATG GCCCGTTGCA
TGGACGCTCG ACATCCCTAA GGACTGGACG CCAGGGACCT ACGTAGCTGT CCTCGATAAG
GCCGACGGGT TCCGGAACTA CGTGCCGTTC GTAGTGCGTG ATGACGAGGC GTCGGCGGAC
TTCCTCGTGG TGCTGCCGTC GACGAGCTGG CAGGCGTACA ACTGGTGGCC GCGTGACGGC
ATCACTGGGC GGAACGTCTA CTACGGGTAC GTCACCAAGG AAGCCGCCGA AAGCGACGCT
GCCCTCAAGG CGAAGTTCTC CACAGACGCG CGCGGCTGGA TCTCGAACCC GGCGCGCGCA
ACGCAGGTCT CCTTCGCGCG CCCCTACTTC GCCGACGGAC TCCCCGACGG CTTCGTCCGC
GAACAGTCCT TCATCCAGTG GGCCGAGGGC ATGGGCTATG ACCTCAGCTA CGCGACAGGG
CTGGACCTCC ACGCCGGACG CATCGACCCG ACCAAGTACC GCGGCCTGAT CTTCGCCGGC
CACGACGAGT ACTGGTCGAC CGACATGTAC CGGCACGCCG AAGAGGCGGT CGCAGCAGGC
ACGTCCCTAG CGTTCCTCAC AGCGAACAAC GCCTACTGGC ACGTCCGCTA CGACGAACAC
ACGCGAACCA TGTCCTGCTA CAAGGGCTTC GAAGACCCCC ACACCGAAGA CTTTCCCACT
GGCATGTGGC GCGCCGGCGA AGGCAACCCC CGCGCCGAAC AGCAACTCAT GGGAGTGCAG
TACAGCGGCA TCCTCAAGGG CCGCCACCCC CTCATCGTCC ACGAAGCCGA CCACTGGTTC
TGGAGCGGCA CCGGCCTCAC AAACGGCGAC GAAATCCCCG GCCTCCTCGG CGGCGAAGCC
GACAGCCTCT TCGAAGCAAT GCCCCGAGCC AAGGCAGAGG AACAGGCACT CCTGACCGCC
TCGCCCTACA CCATCTCCAA CGGCACAAAC TTCACCCAGA ACACCAGCAT CTACCGATCC
CCCAGCGGCG CCTGGGTCTT CACAGCGGGC ACATTCCTCT GGCCTCTAGG CCTAGGCCAC
CCCACCTACC AGGACAAGCG CATCACCCGC GCCACAGCCA ACTTCCTGAG CCGGGTGAAG
GGTTCCTGA
 
Protein sequence
MSSTSKFLRD LAKKTNTASA ARAVLRATHL KSGPGRLSDP RVGLPASVLP AGGNRITAEN 
AKAGSADWRM GASKSRPGTD YERQIKGYAS TDSVAAGEAI DFHIAVEPAG SFTVSVYRLG
YYGGASARRV LVSPTLTAAP QPVPTPDQET GRIALEWPVA WTLDIPKDWT PGTYVAVLDK
ADGFRNYVPF VVRDDEASAD FLVVLPSTSW QAYNWWPRDG ITGRNVYYGY VTKEAAESDA
ALKAKFSTDA RGWISNPARA TQVSFARPYF ADGLPDGFVR EQSFIQWAEG MGYDLSYATG
LDLHAGRIDP TKYRGLIFAG HDEYWSTDMY RHAEEAVAAG TSLAFLTANN AYWHVRYDEH
TRTMSCYKGF EDPHTEDFPT GMWRAGEGNP RAEQQLMGVQ YSGILKGRHP LIVHEADHWF
WSGTGLTNGD EIPGLLGGEA DSLFEAMPRA KAEEQALLTA SPYTISNGTN FTQNTSIYRS
PSGAWVFTAG TFLWPLGLGH PTYQDKRITR ATANFLSRVK GS