Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0342 |
Symbol | |
ID | 8331669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 380045 |
End bp | 381613 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644953509 |
Product | hypothetical protein |
Protein accession | YP_003111136 |
Protein GI | 256389572 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.258196 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGCA CGTCGAAGTT CCTGCGCGAT CTGGCCAAGA AGACCAACAC GGCTTCGGCC GCGCGCGCCG TCCTGCGGGC CACGCATTTG AAGTCCGGGC CGGGGCGGCT CAGTGATCCG CGAGTAGGGC TTCCGGCATC CGTTCTCCCG GCCGGTGGGA ACCGCATTAC TGCGGAGAAC GCTAAGGCGG GTTCTGCGGA CTGGCGCATG GGTGCGAGCA AGTCGCGCCC CGGTACGGAC TACGAGCGGC AGATCAAGGG CTACGCGTCG ACCGATTCGG TGGCGGCCGG GGAAGCTATC GACTTCCATA TCGCGGTGGA GCCCGCGGGG TCCTTCACGG TTTCCGTCTA CCGCCTCGGC TACTACGGCG GCGCCTCGGC TCGCCGCGTC CTGGTGTCGC CGACGCTGAC CGCTGCGCCG CAGCCGGTAC CGACGCCGGA TCAGGAGACT GGCCGGATCG CCTTGGAATG GCCCGTTGCA TGGACGCTCG ACATCCCTAA GGACTGGACG CCAGGGACCT ACGTAGCTGT CCTCGATAAG GCCGACGGGT TCCGGAACTA CGTGCCGTTC GTAGTGCGTG ATGACGAGGC GTCGGCGGAC TTCCTCGTGG TGCTGCCGTC GACGAGCTGG CAGGCGTACA ACTGGTGGCC GCGTGACGGC ATCACTGGGC GGAACGTCTA CTACGGGTAC GTCACCAAGG AAGCCGCCGA AAGCGACGCT GCCCTCAAGG CGAAGTTCTC CACAGACGCG CGCGGCTGGA TCTCGAACCC GGCGCGCGCA ACGCAGGTCT CCTTCGCGCG CCCCTACTTC GCCGACGGAC TCCCCGACGG CTTCGTCCGC GAACAGTCCT TCATCCAGTG GGCCGAGGGC ATGGGCTATG ACCTCAGCTA CGCGACAGGG CTGGACCTCC ACGCCGGACG CATCGACCCG ACCAAGTACC GCGGCCTGAT CTTCGCCGGC CACGACGAGT ACTGGTCGAC CGACATGTAC CGGCACGCCG AAGAGGCGGT CGCAGCAGGC ACGTCCCTAG CGTTCCTCAC AGCGAACAAC GCCTACTGGC ACGTCCGCTA CGACGAACAC ACGCGAACCA TGTCCTGCTA CAAGGGCTTC GAAGACCCCC ACACCGAAGA CTTTCCCACT GGCATGTGGC GCGCCGGCGA AGGCAACCCC CGCGCCGAAC AGCAACTCAT GGGAGTGCAG TACAGCGGCA TCCTCAAGGG CCGCCACCCC CTCATCGTCC ACGAAGCCGA CCACTGGTTC TGGAGCGGCA CCGGCCTCAC AAACGGCGAC GAAATCCCCG GCCTCCTCGG CGGCGAAGCC GACAGCCTCT TCGAAGCAAT GCCCCGAGCC AAGGCAGAGG AACAGGCACT CCTGACCGCC TCGCCCTACA CCATCTCCAA CGGCACAAAC TTCACCCAGA ACACCAGCAT CTACCGATCC CCCAGCGGCG CCTGGGTCTT CACAGCGGGC ACATTCCTCT GGCCTCTAGG CCTAGGCCAC CCCACCTACC AGGACAAGCG CATCACCCGC GCCACAGCCA ACTTCCTGAG CCGGGTGAAG GGTTCCTGA
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Protein sequence | MSSTSKFLRD LAKKTNTASA ARAVLRATHL KSGPGRLSDP RVGLPASVLP AGGNRITAEN AKAGSADWRM GASKSRPGTD YERQIKGYAS TDSVAAGEAI DFHIAVEPAG SFTVSVYRLG YYGGASARRV LVSPTLTAAP QPVPTPDQET GRIALEWPVA WTLDIPKDWT PGTYVAVLDK ADGFRNYVPF VVRDDEASAD FLVVLPSTSW QAYNWWPRDG ITGRNVYYGY VTKEAAESDA ALKAKFSTDA RGWISNPARA TQVSFARPYF ADGLPDGFVR EQSFIQWAEG MGYDLSYATG LDLHAGRIDP TKYRGLIFAG HDEYWSTDMY RHAEEAVAAG TSLAFLTANN AYWHVRYDEH TRTMSCYKGF EDPHTEDFPT GMWRAGEGNP RAEQQLMGVQ YSGILKGRHP LIVHEADHWF WSGTGLTNGD EIPGLLGGEA DSLFEAMPRA KAEEQALLTA SPYTISNGTN FTQNTSIYRS PSGAWVFTAG TFLWPLGLGH PTYQDKRITR ATANFLSRVK GS
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