Gene Caci_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0336 
Symbol 
ID8331663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp374899 
End bp375558 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content74% 
IMG OID644953503 
Productsingle-strand binding protein 
Protein accessionYP_003111130 
Protein GI256389566 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.676311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCG AGACCGTCAT CACCGTCGTC GGCAACCTGA CCGACGACCC CGAACTGCGC 
TTCACCCCCT CGGGTGCGGC GGTCGCGAAC TTCACCGTCG CGTCCACGCC GCGCACCCTG
GACCGCCAGA CCAACGAGTG GAAGGACGGC GACGCGCTGT TCCTGCGCTG CTCGATCTGG
CGCCAGGCGG CCGAGAACGT CGCCGAATCG CTGACCCGCG GCATGCGGGT GATCGTCTCC
GGACGGCTGC GCCAGCGGTC GTACGAGACC AAGGAAGGCG AGAAGCGCAC GGTCGTCGAG
CTCGACGTCG AGGAGATCGG CCCGTCGCTG AAGTACGCGA CGGCGAAGGT CACCAAGGCC
AACCGGCCCG GTGGCCAGGG CGGTCCCGGC GGCGGGGGCG GCGGCGGCTG GAGTGGCAAC
TCCGGCGGCG GCGGCAACTC CGGCAGCGCG GGAGGCGGCG GCGGCTGGGG TGGCAACTCC
GGTGGCGGCG GCAACTCCGG CGGTGGCGGT GGCGGCGGCG GCAGTTGGGG TGGCAACTCC
GGTGGCGGCG GTGGCAACTC CGGCGGCGGG AACCAGGGCG GCGGCAACGA CCCCTGGGCT
TCCGGCGGCG GCGGCGACGG CGGCTGGGGT GGCTACGGCA ACGACGAGCC CCCGTTCTAG
 
Protein sequence
MAGETVITVV GNLTDDPELR FTPSGAAVAN FTVASTPRTL DRQTNEWKDG DALFLRCSIW 
RQAAENVAES LTRGMRVIVS GRLRQRSYET KEGEKRTVVE LDVEEIGPSL KYATAKVTKA
NRPGGQGGPG GGGGGGWSGN SGGGGNSGSA GGGGGWGGNS GGGGNSGGGG GGGGSWGGNS
GGGGGNSGGG NQGGGNDPWA SGGGGDGGWG GYGNDEPPF