Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0336 |
Symbol | |
ID | 8331663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 374899 |
End bp | 375558 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644953503 |
Product | single-strand binding protein |
Protein accession | YP_003111130 |
Protein GI | 256389566 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.676311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGCG AGACCGTCAT CACCGTCGTC GGCAACCTGA CCGACGACCC CGAACTGCGC TTCACCCCCT CGGGTGCGGC GGTCGCGAAC TTCACCGTCG CGTCCACGCC GCGCACCCTG GACCGCCAGA CCAACGAGTG GAAGGACGGC GACGCGCTGT TCCTGCGCTG CTCGATCTGG CGCCAGGCGG CCGAGAACGT CGCCGAATCG CTGACCCGCG GCATGCGGGT GATCGTCTCC GGACGGCTGC GCCAGCGGTC GTACGAGACC AAGGAAGGCG AGAAGCGCAC GGTCGTCGAG CTCGACGTCG AGGAGATCGG CCCGTCGCTG AAGTACGCGA CGGCGAAGGT CACCAAGGCC AACCGGCCCG GTGGCCAGGG CGGTCCCGGC GGCGGGGGCG GCGGCGGCTG GAGTGGCAAC TCCGGCGGCG GCGGCAACTC CGGCAGCGCG GGAGGCGGCG GCGGCTGGGG TGGCAACTCC GGTGGCGGCG GCAACTCCGG CGGTGGCGGT GGCGGCGGCG GCAGTTGGGG TGGCAACTCC GGTGGCGGCG GTGGCAACTC CGGCGGCGGG AACCAGGGCG GCGGCAACGA CCCCTGGGCT TCCGGCGGCG GCGGCGACGG CGGCTGGGGT GGCTACGGCA ACGACGAGCC CCCGTTCTAG
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Protein sequence | MAGETVITVV GNLTDDPELR FTPSGAAVAN FTVASTPRTL DRQTNEWKDG DALFLRCSIW RQAAENVAES LTRGMRVIVS GRLRQRSYET KEGEKRTVVE LDVEEIGPSL KYATAKVTKA NRPGGQGGPG GGGGGGWSGN SGGGGNSGSA GGGGGWGGNS GGGGNSGGGG GGGGSWGGNS GGGGGNSGGG NQGGGNDPWA SGGGGDGGWG GYGNDEPPF
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