Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0329 |
Symbol | |
ID | 8331656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 367879 |
End bp | 368469 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644953496 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003111123 |
Protein GI | 256389559 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.330162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCG ATCCGTCCTC CCCCGCGCAG CAGCAGCTGC GGGCTGACGC GCTGCGCAAT CGCGAGAGCG TGCTCGCCGC CGCGACCGCC GCGTTCGCCG CTTCCGAGGC CGAGCCGTCG ATGCGCGAGA TCGCCCGGCA GGCCGGGGTC GGCGTCGCCA CGCTCTACCG CCACTTCCCG ACCCGGGAGG CGCTCGTCGA CGCCGTGTAT CAGGACCAGG TCGTGCGGCT GACCGCCGGG GCGCGCGACC TGCTCGCCGC GCATCCGCCG GCGCGGGCGC TGCGGCTGTG GATGGACTTG TTCGCCGACT GGCTGACGAC CAAGCGCGGG ATGACCGGCA CGCTGCTCGC CATGGTCGAC GCCGGGGACA TCTCGCTAGC GCACACGCGC GGGGAGCTCC TGGCGGCGAT CGCGACGATC CTCGACGCCG GGATCGCCGC CGGAGAGATC CGCGCGGACA CCAGCGCCGA GGACGTCAGC GCTGCGGTGC TCGGTCTGCT CGCTGTTTCG GGCGAACGCG GGAATCCCGA GCAGGCGCAA CGACTTCTCG ACGTCCTGAT GGACGGGCTC AGGACTCGAT CAGAGCGCTG A
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Protein sequence | MTADPSSPAQ QQLRADALRN RESVLAAATA AFAASEAEPS MREIARQAGV GVATLYRHFP TREALVDAVY QDQVVRLTAG ARDLLAAHPP ARALRLWMDL FADWLTTKRG MTGTLLAMVD AGDISLAHTR GELLAAIATI LDAGIAAGEI RADTSAEDVS AAVLGLLAVS GERGNPEQAQ RLLDVLMDGL RTRSER
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