Gene Caci_0321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0321 
Symbol 
ID8331648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp359470 
End bp360339 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content67% 
IMG OID644953488 
Productfatty acid hydroxylase 
Protein accessionYP_003111115 
Protein GI256389551 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.404063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTTG TGATCGACGG CATAGACCTC ACGACCCTCG CGATCCCCTT CTATGTGCTG 
TTCATGGCAC TGGAGCTGCT CTCGCTGCGG TTCTTCCCGG ACCCGGTCGA GCAGGGCTAC
ACCGTCAAGG ACACCGCGAC GTCGCTGACG ATGGGCATCG GCTCGATCGT CTGCAACCTC
GGCTGGGGAC TGGTGACGGT CGCCGCGGTG GCCGGCGTGC ACGCGCTCGC GCCGTGGCAT
ATCGCCAGTT CGCTGACCGG CTGGCTCGTG CTCTTCGTGG CGTACGACTT CTTCTACTAC
TGGGAGCACC GCGCCAACCA CCGCGTCCGC ATCCTGTGGG CGTCGCATGT GGTGCACCAC
TCCAGCCGGC ACTACAACCT GTCCACGGCG CTGCGCCAGA CCTGGACCGG GGTCGGCAAC
ACGATCTTCC TGCTGCCGCT GGCGCTGGTC GGGTTCCCGT CGTACATGAT CTTCGCGACG
GCGGCGATGA ACCTGCTCTA CCAGTTCTGG ATCCACACCG AGCGGATCGC CACGATGTGG
CGCCCGATCG AGTTCGTGAT GAACACGCCC TCGCACCACC GCGTGCACCA CGGCTCGAAC
CAGGGCTACC TGGACAAGAA CTACGGCGGC GTGTTCATCG TCTTCGACCG GCTGTTCCGG
TCTTTCGAGC CCGAGGGCGA GCCGGTGGAG TACGGGCTGA CGAAGAACAT CGGGACGTTC
AATCCGCTGC GTGTCGCAGC GCACGAATAC GCCGCGATCG CGCGGGACGT GCGCGGCGCC
GCAGGCTGGC GGGCACGGTT CGGTTACGTG CTGCGCGGCC CGGGCTGGTC GCCGGCGAGC
CCGGTGCCGG CGACCGCGGT GACGGTCTAA
 
Protein sequence
MRLVIDGIDL TTLAIPFYVL FMALELLSLR FFPDPVEQGY TVKDTATSLT MGIGSIVCNL 
GWGLVTVAAV AGVHALAPWH IASSLTGWLV LFVAYDFFYY WEHRANHRVR ILWASHVVHH
SSRHYNLSTA LRQTWTGVGN TIFLLPLALV GFPSYMIFAT AAMNLLYQFW IHTERIATMW
RPIEFVMNTP SHHRVHHGSN QGYLDKNYGG VFIVFDRLFR SFEPEGEPVE YGLTKNIGTF
NPLRVAAHEY AAIARDVRGA AGWRARFGYV LRGPGWSPAS PVPATAVTV