Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0321 |
Symbol | |
ID | 8331648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 359470 |
End bp | 360339 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644953488 |
Product | fatty acid hydroxylase |
Protein accession | YP_003111115 |
Protein GI | 256389551 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.404063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTTG TGATCGACGG CATAGACCTC ACGACCCTCG CGATCCCCTT CTATGTGCTG TTCATGGCAC TGGAGCTGCT CTCGCTGCGG TTCTTCCCGG ACCCGGTCGA GCAGGGCTAC ACCGTCAAGG ACACCGCGAC GTCGCTGACG ATGGGCATCG GCTCGATCGT CTGCAACCTC GGCTGGGGAC TGGTGACGGT CGCCGCGGTG GCCGGCGTGC ACGCGCTCGC GCCGTGGCAT ATCGCCAGTT CGCTGACCGG CTGGCTCGTG CTCTTCGTGG CGTACGACTT CTTCTACTAC TGGGAGCACC GCGCCAACCA CCGCGTCCGC ATCCTGTGGG CGTCGCATGT GGTGCACCAC TCCAGCCGGC ACTACAACCT GTCCACGGCG CTGCGCCAGA CCTGGACCGG GGTCGGCAAC ACGATCTTCC TGCTGCCGCT GGCGCTGGTC GGGTTCCCGT CGTACATGAT CTTCGCGACG GCGGCGATGA ACCTGCTCTA CCAGTTCTGG ATCCACACCG AGCGGATCGC CACGATGTGG CGCCCGATCG AGTTCGTGAT GAACACGCCC TCGCACCACC GCGTGCACCA CGGCTCGAAC CAGGGCTACC TGGACAAGAA CTACGGCGGC GTGTTCATCG TCTTCGACCG GCTGTTCCGG TCTTTCGAGC CCGAGGGCGA GCCGGTGGAG TACGGGCTGA CGAAGAACAT CGGGACGTTC AATCCGCTGC GTGTCGCAGC GCACGAATAC GCCGCGATCG CGCGGGACGT GCGCGGCGCC GCAGGCTGGC GGGCACGGTT CGGTTACGTG CTGCGCGGCC CGGGCTGGTC GCCGGCGAGC CCGGTGCCGG CGACCGCGGT GACGGTCTAA
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Protein sequence | MRLVIDGIDL TTLAIPFYVL FMALELLSLR FFPDPVEQGY TVKDTATSLT MGIGSIVCNL GWGLVTVAAV AGVHALAPWH IASSLTGWLV LFVAYDFFYY WEHRANHRVR ILWASHVVHH SSRHYNLSTA LRQTWTGVGN TIFLLPLALV GFPSYMIFAT AAMNLLYQFW IHTERIATMW RPIEFVMNTP SHHRVHHGSN QGYLDKNYGG VFIVFDRLFR SFEPEGEPVE YGLTKNIGTF NPLRVAAHEY AAIARDVRGA AGWRARFGYV LRGPGWSPAS PVPATAVTV
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