Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0320 |
Symbol | |
ID | 8331647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 358702 |
End bp | 359427 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644953487 |
Product | Phytanoyl-CoA dioxygenase |
Protein accession | YP_003111114 |
Protein GI | 256389550 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.349196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTGAGCA CTGAACAGCT GAAGGAATTC GGCGAGCGGG GGTACGTCGT CGTCCCGGGT GTGGTGGCTC GGAACGTCGT GGCAAAAGCG AACAAGCGGA TCGACGAGCT GATCGCCGCC AACCCGCCGG CGCAGGGACA GGTCGGCCAC CACTTCTACT TTCCGGCGGC GGCGGACGAG CCGGAGTTGC TCGAGACGCT GATGGACAGC GCTTTCGGGT ACGCCGAGGC GCTGACCGGT CCCGGGCTTC TGGAGACGCC GCAGCAGGTG CAGGTGGCGC TGAACATCCC GCCGTTCTCG CACCGGCCGG GGCGGCCGCA CATCGACGCC GCGATCAGCG AGCCGACGCC GGGCTTCACG CCGAACAGTT TCACGCTGCT GGCCGGCGTG TTCGTCACCG ACCAGCTGCG GGAGAACTCG GGGAACCTGT GGGTCTGGCC GGGGACGCAC CGCACGCACG CGGAGTACTT CCGCGAGCGC GGCATCGAGA TGTACTGCGC GTACCCGGAC ATCGAGCTGC CCGAGCCGGA ACAGGTCACC GCGCGCGCCG GCGACCTGCT GCTCGCGCAC TATCTGCTCG GGCACAACAT CGGCGGGAAC TACGAGTCGG ACACGACGCG GCGGATGCTG TACTACCGGG TCAGCGGTCG CGGGCACGCC GAGGGTCCGG AGCGGATCCT GACCGAGCCC TGGTATGAGT ACGGCCCTGT TCGTGCCCTG ATTTAG
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Protein sequence | MLSTEQLKEF GERGYVVVPG VVARNVVAKA NKRIDELIAA NPPAQGQVGH HFYFPAAADE PELLETLMDS AFGYAEALTG PGLLETPQQV QVALNIPPFS HRPGRPHIDA AISEPTPGFT PNSFTLLAGV FVTDQLRENS GNLWVWPGTH RTHAEYFRER GIEMYCAYPD IELPEPEQVT ARAGDLLLAH YLLGHNIGGN YESDTTRRML YYRVSGRGHA EGPERILTEP WYEYGPVRAL I
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