Gene Caci_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0320 
Symbol 
ID8331647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp358702 
End bp359427 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content68% 
IMG OID644953487 
ProductPhytanoyl-CoA dioxygenase 
Protein accessionYP_003111114 
Protein GI256389550 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.349196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGAGCA CTGAACAGCT GAAGGAATTC GGCGAGCGGG GGTACGTCGT CGTCCCGGGT 
GTGGTGGCTC GGAACGTCGT GGCAAAAGCG AACAAGCGGA TCGACGAGCT GATCGCCGCC
AACCCGCCGG CGCAGGGACA GGTCGGCCAC CACTTCTACT TTCCGGCGGC GGCGGACGAG
CCGGAGTTGC TCGAGACGCT GATGGACAGC GCTTTCGGGT ACGCCGAGGC GCTGACCGGT
CCCGGGCTTC TGGAGACGCC GCAGCAGGTG CAGGTGGCGC TGAACATCCC GCCGTTCTCG
CACCGGCCGG GGCGGCCGCA CATCGACGCC GCGATCAGCG AGCCGACGCC GGGCTTCACG
CCGAACAGTT TCACGCTGCT GGCCGGCGTG TTCGTCACCG ACCAGCTGCG GGAGAACTCG
GGGAACCTGT GGGTCTGGCC GGGGACGCAC CGCACGCACG CGGAGTACTT CCGCGAGCGC
GGCATCGAGA TGTACTGCGC GTACCCGGAC ATCGAGCTGC CCGAGCCGGA ACAGGTCACC
GCGCGCGCCG GCGACCTGCT GCTCGCGCAC TATCTGCTCG GGCACAACAT CGGCGGGAAC
TACGAGTCGG ACACGACGCG GCGGATGCTG TACTACCGGG TCAGCGGTCG CGGGCACGCC
GAGGGTCCGG AGCGGATCCT GACCGAGCCC TGGTATGAGT ACGGCCCTGT TCGTGCCCTG
ATTTAG
 
Protein sequence
MLSTEQLKEF GERGYVVVPG VVARNVVAKA NKRIDELIAA NPPAQGQVGH HFYFPAAADE 
PELLETLMDS AFGYAEALTG PGLLETPQQV QVALNIPPFS HRPGRPHIDA AISEPTPGFT
PNSFTLLAGV FVTDQLRENS GNLWVWPGTH RTHAEYFRER GIEMYCAYPD IELPEPEQVT
ARAGDLLLAH YLLGHNIGGN YESDTTRRML YYRVSGRGHA EGPERILTEP WYEYGPVRAL
I