Gene Caci_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0315 
Symbol 
ID8331642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp355276 
End bp355788 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content70% 
IMG OID644953482 
ProductTPR repeat-containing protein 
Protein accessionYP_003111109 
Protein GI256389545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCTTG ACTTCCGCAC CGACCCGGAG ACGCTCCGCG AGATCGTCGA CGATCCCGCG 
GCACTGGCGG CCCGCATCCA CACCCTGGCC GCCCTCGACA TGGACGAGCA CCCCGAAGCC
CGCTCCGAGT ACGCCACCCT CCTGCGCATC GCCGGCCGCC TCGACGACGC CGCCCTGGAG
GCCGAACTCA CCCTCGCCGC CGCCGACCTG GCCGGCGACC TCCGCCGCAT GGTCCGCGCC
ACCCTCCTGG TCGGCCACGT CCGCCAATAC CGCGGCGAAT GGGACCAGGC CGACACCATG
TTCCACCGAG CAGAGAAACT TGCCCTGTAT CTCAAGGACG ACCGCCTGGT AGCCGCCGCG
GCCCACCACT CCGGCCGCAG CTTCTACGAC CAGGGCAAGC ACGTGGAAGC CGCCCTGCGC
TTCCGCCTCG CCCTGGAGAT CGACACGAGG ATCGGCAGCC CGAAGGTGTC CGCCGTGTGG
GAGGCGTTCG AGGCGGCGAT GGCGAAGTTG TAA
 
Protein sequence
MGLDFRTDPE TLREIVDDPA ALAARIHTLA ALDMDEHPEA RSEYATLLRI AGRLDDAALE 
AELTLAAADL AGDLRRMVRA TLLVGHVRQY RGEWDQADTM FHRAEKLALY LKDDRLVAAA
AHHSGRSFYD QGKHVEAALR FRLALEIDTR IGSPKVSAVW EAFEAAMAKL