Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0315 |
Symbol | |
ID | 8331642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 355276 |
End bp | 355788 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644953482 |
Product | TPR repeat-containing protein |
Protein accession | YP_003111109 |
Protein GI | 256389545 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCTTG ACTTCCGCAC CGACCCGGAG ACGCTCCGCG AGATCGTCGA CGATCCCGCG GCACTGGCGG CCCGCATCCA CACCCTGGCC GCCCTCGACA TGGACGAGCA CCCCGAAGCC CGCTCCGAGT ACGCCACCCT CCTGCGCATC GCCGGCCGCC TCGACGACGC CGCCCTGGAG GCCGAACTCA CCCTCGCCGC CGCCGACCTG GCCGGCGACC TCCGCCGCAT GGTCCGCGCC ACCCTCCTGG TCGGCCACGT CCGCCAATAC CGCGGCGAAT GGGACCAGGC CGACACCATG TTCCACCGAG CAGAGAAACT TGCCCTGTAT CTCAAGGACG ACCGCCTGGT AGCCGCCGCG GCCCACCACT CCGGCCGCAG CTTCTACGAC CAGGGCAAGC ACGTGGAAGC CGCCCTGCGC TTCCGCCTCG CCCTGGAGAT CGACACGAGG ATCGGCAGCC CGAAGGTGTC CGCCGTGTGG GAGGCGTTCG AGGCGGCGAT GGCGAAGTTG TAA
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Protein sequence | MGLDFRTDPE TLREIVDDPA ALAARIHTLA ALDMDEHPEA RSEYATLLRI AGRLDDAALE AELTLAAADL AGDLRRMVRA TLLVGHVRQY RGEWDQADTM FHRAEKLALY LKDDRLVAAA AHHSGRSFYD QGKHVEAALR FRLALEIDTR IGSPKVSAVW EAFEAAMAKL
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