| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0311 |
|---|
| Symbol | |
|---|
| ID | 8331638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 351679 |
|---|
| End bp | 352761 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644953478 |
|---|
| Product | Peptidoglycan-binding domain 1 protein |
|---|
| Protein accession | YP_003111105 |
|---|
| Protein GI | 256389541 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTGGG AGCTGCCGGC GCAGGGCCAG GCCCAGGAAG CGACCCAGGC CATCCCGGCG
CAGAACGGTT CGCTGAACCC TGATTCGCTG AACCCTGAGG TGTACGCCAG CCTGTTCCGC
CCTGAGGGCG CTCCGGCGCG CGCGAACCCG AACGCCACGC AGGTCATGCC GTCGGTCCCG
GACGACTACG GCCGGCCCGG GTACGACCAG GACGGCTATC CGCAGGCCGG ATACGACCAG
CGTGCTGCGA ACCAGCCCGC CTACGACCAG CCGATCGACT ACCAGGCCGC GGGCGGCGGC
GCCTACGCCG AGCCTTACGA GACCGGATAC GCCGACGACT ACCCGGACGA GCCCAGCGCC
CGTCCGTCCA ATCGCGGGAC GAAGATCGGC ATCGGTGTCG CGGCCGGCGC GGTGCTGGTG
ATCGTGATCT CGCTGATCAC CCTCGGCGGC GGCAGCTCGA AGCCCTCCGC CGGACCGGCC
AACACGCCGG GCACGGTCAC CACGCCGACC GTGCCGCCGA GCACCTCCGC GCCGCAGGTC
GCGGCCAGCG ACCCGGCCAC CTCCACGCCG AGCAGCCCGG CCAGCTCGAC GTCGCACGCC
CCGGGGACGC TGCAGCTCGG CGACTCCGGC GCCGAAGTGA AGTGGCTGCA GACGCGGCTG
CACCAGCTGG GCGTCTACAA CGGCCCGATC AACAGCAAGT TCGACGCCGC CACGCAGGCC
GCGGTCGCCG CGTTCCAGGC GAAGACCCAC GCGAGCGACC CCGCGGGCGT CGTCGGCCGG
TCCACCAAGA CCGCGCTGAT CGCGGCGGGG AGCAAGCCGA CCCTGATGGG GCAGGTGCCG
AATCTGCCCG GCGGTCCGCT CGGCGGGGAC AAGCACCACC GGGGCAACAA CCCCGCGGAC
GTGAAGCGGC TGCAGCAGGC GCTGGCCGTC GCGCTGAACA CGAACCTGAA GGCCACCGGC
CAGTTCGACC TGGACACCTT CGGCGCGGTG GTGCAGTACC AGGGCGCGAT GCACATGACG
CCGGACGGGC TGGTCAACGG CACGGTGTGG GCGGCGCTGC AGCAGGGGCG GATCTCGGGC
TGA
|
|---|
| Protein sequence | MTWELPAQGQ AQEATQAIPA QNGSLNPDSL NPEVYASLFR PEGAPARANP NATQVMPSVP
DDYGRPGYDQ DGYPQAGYDQ RAANQPAYDQ PIDYQAAGGG AYAEPYETGY ADDYPDEPSA
RPSNRGTKIG IGVAAGAVLV IVISLITLGG GSSKPSAGPA NTPGTVTTPT VPPSTSAPQV
AASDPATSTP SSPASSTSHA PGTLQLGDSG AEVKWLQTRL HQLGVYNGPI NSKFDAATQA
AVAAFQAKTH ASDPAGVVGR STKTALIAAG SKPTLMGQVP NLPGGPLGGD KHHRGNNPAD
VKRLQQALAV ALNTNLKATG QFDLDTFGAV VQYQGAMHMT PDGLVNGTVW AALQQGRISG
|
|---|
| |