Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0309 |
Symbol | |
ID | 8331636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 349752 |
End bp | 350393 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644953476 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003111103 |
Protein GI | 256389539 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.302465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGACGCA ACTCACAGTC GGAGCACGAC CCCGGCGGTA CCAAGGAACG CATCCAGCAC GTCGCGCTGG AGCTGTTCGT CCTGCACGGG TATGAGAAGA CCTCACTGCG CGAGATCTCC GACCGCCTCG GCATCACCAA GGCCGCGCTG TACTACCACT ACGCGTCCAA GCAGGAGCTG CTGAAGTCGG TCACCCAGCC GCTGATCGAC GAGTTCGAAC TCCTGGTCGC CGGCGATCCG GATCCCGAGA CGCTGCTGCG TTCCTACGTC GACCTGCTGC ATCGGCACCA GGCGGTCTTC CAGTTGGTCG CCAACGACCA CGCCAGCCTG GCCGCCGCCG AGCTGGTCGA GCGCTCGGTG AAGCTGCGGC GGGACGTCGT GCGCAGGCTG GCCGGCCCCG AGCCGCAGCC CGCCGACTAC ATCCGCGCCG CGGCTGCGTT CGGAGCCATA TCGCAGGGCT TCATGCTCGC GCGGCGCGTC GAGCCGGCGG CCGATCCGGC GCTGCCGGAC GTCGAGGCGA CCGCGGAGAA GGCTGCCGAG ACGGCTGCCG GACTACCGGC TCCGGCGGAC TACCCCGAGG GCGCCGAGCT CACGCGGATC TTGATGGACA CCGCGCTGGC GGTGCTGCGC TCCGGGTCCT GA
|
Protein sequence | MRRNSQSEHD PGGTKERIQH VALELFVLHG YEKTSLREIS DRLGITKAAL YYHYASKQEL LKSVTQPLID EFELLVAGDP DPETLLRSYV DLLHRHQAVF QLVANDHASL AAAELVERSV KLRRDVVRRL AGPEPQPADY IRAAAAFGAI SQGFMLARRV EPAADPALPD VEATAEKAAE TAAGLPAPAD YPEGAELTRI LMDTALAVLR SGS
|
| |