Gene Caci_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0304 
Symbol 
ID8331631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp342700 
End bp344181 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content72% 
IMG OID644953471 
Productcytochrome bd ubiquinol oxidase subunit I 
Protein accessionYP_003111098 
Protein GI256389534 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGCA GCAGTCTCAG CGACGCCCGC ATCGAGACCG GGTTCTCGCT CGCCTTCCAC 
ATCGTCTTCG CCGTCTTCGG GGTCGGGCTG CCCTGGCTCC TGCTGGTCAC CGAGGGCCGC
TGGCTGAAGA CCCGCGATCC GGTGTGGCTC GCCCTGACCC GCAAGTGGTC GCGGGTGATG
GCGGTGCTGT TCGCCATCGG CGCGGTGTCC GGGACCGTCC TGTCCTTCGA GTTCGGGCTG
CTGTGGCCGG CGTTCATGGC GCGCTACGGC GGGGTGCTCG GGCTGCCCTT CACGCTGGAG
GCCTTCGCCT TCTTCGCCGA GGCGATCTTC GTCGGCCTCT ACCTCTACGG CTGGAAGCGC
CTGTCGCCGC GTGCGCACTG GCTCACGCTC TGGCCGATCG CCATCTCCGG CACGCTCTCG
ACGTTGTTCA TCGTCACCGC GAACTCCTGG ATGAACGTCC CGACCGGCGT CAAGGAGGTC
GGCGGCAAGG TCGTCTCCGC CGAACCGCTG GCGCCGCTCA CCGGCCCGGG CGCGCTGCCG
GAGTCGCTGC ACATGCTGCT CGCCGCGATC ATGTGCACCG GCGGCGTGGT CGCCGCGGTC
TACGCGGTCG GGATGCTGCG CGGGCGGCGC GACTCCTATC ACCGGCGCGG CTTCCGTGTC
GGGCTGGTCA CGGTCCTGGC GGCGGCGCCG CTCCAGCTGG TGGTCGGCGA CCTGGCCGCG
CGCGTGGTCG AGAAGTACCA GCCCGCGAAG CTCGCCGCGA TGGAAGCCCT GACCCACACC
CAGAGCCACG CCCCGCTGAC CCTCGGCGGG ATCTACGACC CGAGCACCGG CAAGACCCGC
TTCGGCATCG AGATCCCGGA CGGGCTGTCC CTGCTGACCG GCTTCCGGAC CGACAAGACC
ATCCGGGGTC TGGACATCCT GCCCGCCAAG CAGCAGCCCG CGACGCCGGT GGTGCACCTG
GCCTTCGACA CGATGGTCGG CGGCGGCATG GCGATCCTCG GCCTCGCCGG GCTGCTCGCC
GTGGTCGCGC TCTGGCGCCG CCGCAAGGGT GTCCGTCCCC TGATCCCGCT GACCCGGCCC
TGGCTGCTGG CCGGCGCGCT GACCGGCCCG GCGGCGATGG CCGCGATGCT GGCCGGCTGG
GAGGTCACCG AGGCCGGGCG CCAGCCGTGG ATCGTCTACG GCCGGATGAC CGTGCGCCAG
GCGGCGACCA CCAGCGGCGG CATCGGCTGG TCGCTGATCG CCACGATCGC GGTCTACCTG
GGACTGGCCA CGGCGCTGCT GCTGATCCTG CGCCGGCTGG CGACCGGCGC CCCGCCGGAG
CTGGCGGAAG GCGCCGAGCC GTCGGGTCCG CAAGACCCTG AGTCCCCCAC GCACGAGCCT
TCGGGCTCTG AGGGCGATGC GGAAGACAGC CCCGAGAGCA CTGAGACCAA CGCCGAAAGC
ACCCCCGAAA GCAGCCCCGA ACTGGAAGGA GCAGCCCGAT GA
 
Protein sequence
MLGSSLSDAR IETGFSLAFH IVFAVFGVGL PWLLLVTEGR WLKTRDPVWL ALTRKWSRVM 
AVLFAIGAVS GTVLSFEFGL LWPAFMARYG GVLGLPFTLE AFAFFAEAIF VGLYLYGWKR
LSPRAHWLTL WPIAISGTLS TLFIVTANSW MNVPTGVKEV GGKVVSAEPL APLTGPGALP
ESLHMLLAAI MCTGGVVAAV YAVGMLRGRR DSYHRRGFRV GLVTVLAAAP LQLVVGDLAA
RVVEKYQPAK LAAMEALTHT QSHAPLTLGG IYDPSTGKTR FGIEIPDGLS LLTGFRTDKT
IRGLDILPAK QQPATPVVHL AFDTMVGGGM AILGLAGLLA VVALWRRRKG VRPLIPLTRP
WLLAGALTGP AAMAAMLAGW EVTEAGRQPW IVYGRMTVRQ AATTSGGIGW SLIATIAVYL
GLATALLLIL RRLATGAPPE LAEGAEPSGP QDPESPTHEP SGSEGDAEDS PESTETNAES
TPESSPELEG AAR