| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0302 |
|---|
| Symbol | |
|---|
| ID | 8331629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 340009 |
|---|
| End bp | 341532 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644953469 |
|---|
| Product | Lysozyme |
|---|
| Protein accession | YP_003111096 |
|---|
| Protein GI | 256389532 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACTGT CGAAGCGCGC CCGCGTCATA GGGATCTCAC TCGCCACCGC TGCCGTCGTC
GGCGCCGGGG CCGTCGCCGC CTTCTCGGCC GGCGCCGCCG GAAGCAGCAG TGGCAGCGTC
ACGGCCGCCT TCGCCAAAAC GTCCGACTGG GGTACCGGCT TCCAGGGCCA GTACACGATC
GCCAACAGCA CCGGCCAGAC CGTGCACGGC TGGACCGTCT CCTTCGACCT GCCGTCCGGG
GAGCGCATCA GCTCCCTGTG GAACGGCACC ATGACCGCCG CCGGGCAGCA CATCACGGTC
GCCAATCCGA CCTGGGCCGG CGACATAGCC ACCGGGACCA GCGCGACGTT CGGCTTCGTG
GTGGACGCCA CCTCCGGGTC CACCGCGCCG CAGAATTGCC TGGTCAACGG AGCGTCCTGC
GACGGCGGGA CGCCCGGCGG CGGTCAGAGC TCGGCGCCCG GCGGCGCCCC GAGCACGGCA
CCGGGTTCCA GCTCGGCTCC CAGCAGCGCT CCGTCGAGCG CGCCGAGCAG CGTCCCGTCC
TCGGCACCGA GCAGCGCGCC GTCCTCGGCT CCCTCCTCGG TGCCGCCGCC GCCCGCCTCC
AGCGGCTCCT ACAGCTTCGC GCCCTACGTG GACACCAGCC AGCGCCAAGA CCTCGGCGCG
ATCGCGACGG CGGCCGGGGC GAAGGACGTG ACCGCGGCGT TCATGCTCGC CGGCGGCAGC
GGCTGCACCC CGGCGTGGAA CGGCTCGGCC GACGCCGGCT TCGAAGGCGC CCTGAAGGCG
GGCGTCGCCG ACCTGCGCGC CAAGGGCGGC GACGTCATCG CCTCCTTCGG CGGCGCCAAC
GGCACCGAGC TGGCCGGCGC CTGCAAGGAC GTGCCGAGCC TGAAGGCCGC CTACAAGTCG
GTGATCGACG CCTACAACCT GACCCACGTG GACTTCGACA TCGAGGGCGC GGCCACCACC
GATCAGGCCT CGATCACCCG CCGGGCCCAG GCGTTGGCGC AGCTGCAGGC GGACTACGCC
GCCGCCGGCA AGACCCTGGA CGTGTCGCTG ACCCTGCCGG TCCTGCCCTC CGGGCTGACC
CAGGACGGGG TGAACATCGT CACCGCGGCG GCCACGAACA ACCTGAAGAT CTCGGTCGTG
AACGTGATGG CCATGGACTT CGGCGACTGG GCCGCCCCGA GCCCGTCCGG GAAGATGGGC
CAGTACGCCG ACCAGTCCGC GCAGTCCGTG CACGACCAGC TCAAGAGCGT CTACCCCGGC
GCGACCGACG CCCAGCTGTG GTCGATGGTC GGGATCACCC CGATGATCGG CGTCAACGAC
ACCTCCGACG AGGTGTTCCA GGTCTCCGAC GCCTCGGTCG TGGAACAGTT CGCCGCGCAG
CACCACATCG GCCGGCTGGC CATGTGGTCC CTGACGCGGG ACCAGGCGTG TGCGCAGCCG
TCGTCGTGGG CTTCCCCCAC CTGCTCCTCG ATCCAGCAGA ACACGTACGA CTTCGCGCAC
ACCTTCGAGG CCTTCACGGG CTGA
|
|---|
| Protein sequence | MGLSKRARVI GISLATAAVV GAGAVAAFSA GAAGSSSGSV TAAFAKTSDW GTGFQGQYTI
ANSTGQTVHG WTVSFDLPSG ERISSLWNGT MTAAGQHITV ANPTWAGDIA TGTSATFGFV
VDATSGSTAP QNCLVNGASC DGGTPGGGQS SAPGGAPSTA PGSSSAPSSA PSSAPSSVPS
SAPSSAPSSA PSSVPPPPAS SGSYSFAPYV DTSQRQDLGA IATAAGAKDV TAAFMLAGGS
GCTPAWNGSA DAGFEGALKA GVADLRAKGG DVIASFGGAN GTELAGACKD VPSLKAAYKS
VIDAYNLTHV DFDIEGAATT DQASITRRAQ ALAQLQADYA AAGKTLDVSL TLPVLPSGLT
QDGVNIVTAA ATNNLKISVV NVMAMDFGDW AAPSPSGKMG QYADQSAQSV HDQLKSVYPG
ATDAQLWSMV GITPMIGVND TSDEVFQVSD ASVVEQFAAQ HHIGRLAMWS LTRDQACAQP
SSWASPTCSS IQQNTYDFAH TFEAFTG
|
|---|
| |