Gene Caci_0295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0295 
Symbol 
ID8331622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp332467 
End bp333234 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content74% 
IMG OID644953462 
Producthypothetical protein 
Protein accessionYP_003111089 
Protein GI256389525 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGA CCCGCCGCCC CGCCTCCGCC AAGGTCCGCC AAGCCGTCGT GAACCAGTGG 
CAGGCCCATG TCGGCTACGC CGCCGCCCTG ACCGCCGAGC AGCTCGCGGC GCCGTCGAAG
CTCGCCGGCT GGGACGTGAA GACGCTGGTC GGGCACGTCG CCTTCACGGT GCGCACGGTC
GTGACCCGGG CCGCCGAGCC GGTCGCCGGG GACCAGGCCG AGGTCTACGA CTGGCTGACC
GCGACCCCGA CCGCCAGCGC CGCGGTCGAC GCCGGGACCC GCGAGCTGGT GGAGGACGGC
GTGGTCCTGG CCGACGAGGT GACCGAGGCC GAGAAGCTCA TGGAGCGCTA CGGCGACGAG
GACCTGATCG CCATGCGCTT CGGGCCCATG CGCTTCGACG ACTTCCTGGT CTCGCGCATC
GTGGAGGCCA CGGTGCACGC CGACGACCTG GAGCGGTCCA CCGGGATCGA GTTCCCGCAC
GACCGGGAGG CGCTGGCGAT CACCGTCCGG CAGCTGGCCG ACGCCATGGC GGCCAAGGTC
CCGGGCAACT CGGTGGAGCT GCGGGTCCCG CCGTTCGCCG CCGTGCAGTG CGTCCCGGGT
CCGCGCCACA CGCGGGGCAC GCCGCCGAAC GTGGTCGAGA TGACGCCGCG GACCTGGATC
CGGCTCGCCG CGGGCCGGAT GACCTGGGAC GAGGCGATGG ACCAGGCGCT GGTGTCGGCG
TCGGGGCAGC GGGCGGACCT GAAGGAGTTC CTGCCGCTCA TGGGGTGA
 
Protein sequence
MPKTRRPASA KVRQAVVNQW QAHVGYAAAL TAEQLAAPSK LAGWDVKTLV GHVAFTVRTV 
VTRAAEPVAG DQAEVYDWLT ATPTASAAVD AGTRELVEDG VVLADEVTEA EKLMERYGDE
DLIAMRFGPM RFDDFLVSRI VEATVHADDL ERSTGIEFPH DREALAITVR QLADAMAAKV
PGNSVELRVP PFAAVQCVPG PRHTRGTPPN VVEMTPRTWI RLAAGRMTWD EAMDQALVSA
SGQRADLKEF LPLMG