| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0281 |
|---|
| Symbol | |
|---|
| ID | 8331608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 318027 |
|---|
| End bp | 318638 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644953448 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003111075 |
|---|
| Protein GI | 256389511 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTTA CGCGGGAATC CGATCAGCAC GGTTCCGAGC AGTACGGGAC TGATGAAACC
GGGTCCATCA CCGGCGGCTC CGGCGACGAG GAGTTCGGCC GGCTGGTCGT CGCGCGCTCG
CACGCCCTCC GCCGGACGGC GTATCTGATG TGCGGCGACT GGTTCGAGGC CGAGGATCTG
GTCCAACAGG CGCTCATCAA GCTGCACGCC GCCTGGGGGC GGGTGCAGCG CCACGACGAC
CTGGACGCGT ATCTGCGCAA GACCCTGCTG CGGACCTGTA TCGACGAGAA ACGCAGGGCC
CGGTGGAGCA AGGAGCATCC GGCCTCGGAC GCGATGCCGG ACACCGTCGA GGCGCCGGGC
GAGCCCGATC CCGAGACGCT GTCCGATCGC GACGAGCTGG TCGCCGCCCT GCGCGAGCTG
CCGAGCGGCC AACGGGCCGT GCTGATACTG AGGTTCTGGG AGGACCTCAG CGTCGAGGAG
ACGGCGCAGT TGCTCAAGTG CACGGCGGGC ACTGTGAAGA GCCAGACCTC GCGTGGGCTG
GGCGCGCTGC GGGAGGCGTT CGGGGTGGAC CGCGCCGGTG CCCTGTTGGC GAGGACGGAA
GGGAAGGCAT GA
|
|---|
| Protein sequence | MRVTRESDQH GSEQYGTDET GSITGGSGDE EFGRLVVARS HALRRTAYLM CGDWFEAEDL
VQQALIKLHA AWGRVQRHDD LDAYLRKTLL RTCIDEKRRA RWSKEHPASD AMPDTVEAPG
EPDPETLSDR DELVAALREL PSGQRAVLIL RFWEDLSVEE TAQLLKCTAG TVKSQTSRGL
GALREAFGVD RAGALLARTE GKA
|
|---|
| |