Gene Caci_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0280 
Symbol 
ID8331607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp316528 
End bp317934 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content72% 
IMG OID644953447 
Producthypothetical protein 
Protein accessionYP_003111074 
Protein GI256389510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCGA CGACGGCGCG GGTGAGCGCT CACAGGGCGG CCCGCGCGCT ACTGCGCGTC 
CGCGCGTGGG TGATAGCGGC GTACGCCCTG AGCGCTGCCG CGGCATGCGC GGCTCTGATC
GGACTGGCGC GCGTGCGCGG CTGGGACGGT GTCGGAGCCG GTGCGGTCGG GGCGGCTGCG
GTGGTGTGCG TGCTGTGGGC ACTGCCCGCG ATCCGGCTGC ATAGAGGCGC TTTGGCGCCG
CCGAAGACTG TGCAACTGGC CGGTGAGTCG GCGCCCGAAC TCGAACTGTT GGTGCGGCAG
TTGGCGCTGC AACTCCAAGT GCCGACTCCT GCCGGCATCG AGCTGTCTCC CGACTGTGAT
GCCTGGCTGG ATCCTCGTCC CGGCGGTCCG GTGCTCGTCA TCGGGGCGCC TTTCCTGTGG
TGGCTGCGCG TCAGCGAGTT GCGCGGGTTG CTGGCGCCGT TGGTCGCCGG GATGGCGGCG
GCCGGGGACG AACGGATCGT GCGGGCGCGG GCGTTCGCCA ACCGGAGTAT CGGTGCGCTT
CATGGTCGTC CGGGGCGGAC GCCGCATGTG TTTCCTTCGT TGCGCCGACG GCTGGCGGGG
TACTTCGAAG CTCGCGCGGA GGTACTGGAG CGGGTTGTCG CGTGGGAGGC AGTGGCAGCC
TCGCGGATGA TCGAGCCCGC CGCGCGCGCT TATGCACATG AGCAGATCAA CATGGCGGCC
GCCGGGTGGG ACCGCGTGCT CACTCGTTTG GCGCAGCCGG CGTGGGAGTC GGGGTACTGC
CCGGTCGGGC TGAACGTGGC GCTGGTCGGG GCGCTGACCT CGTTGGGGCG CCGGGACCGG
ATGGCCGGTT CGCTGGCGAC GCGGCTGAGC GAGCGGCCGG CGTGCGACCT GCTGGAGGAG
CCCGGGGACG TGGACGCGCG CGCGTCGCGG ATGGCCGCGG AGCTGTTCGA GGGGCGGCGG
ATCGAGCGGA CGGTGACGTG GGAGCGGTAC GTCACGGCGG TCACGGAGCC GGAGCTGGTG
CGGCGCGCGG AGTCGGTGCC GGACGAGCAT CCTGTGGCGA AGCGGATACG CACCCTGATC
AGCGAGGCGG GGGTGCCGGG GGCGCGGCAG GGCGGGGTGT CCGATGGTGG GACGCGGAGT
GCGGTGATCC CGGCTCCGCG CGTGGGGGAA GCCGACGGGG TTCCGTCGGG CGATGTCATG
GAGCCGGACA TCGACGACTT CGCGGCGTAT CTGGCGGTGC GGCTCGTCGA GGCGCGGCTG
GCGGCGTGGG GACTGGACTG GCTGGACGGG CCGGTGCTGC GCGACCGCGC CGGCGACCCG
GTGCCGATCC ACGACATGGC GGCGTCGGTC GCAGACGTCG GTGATGTTTC CCGATTGTCT
GATTGGCTGG CTAGAAACCT CCCCTGA
 
Protein sequence
MTATTARVSA HRAARALLRV RAWVIAAYAL SAAAACAALI GLARVRGWDG VGAGAVGAAA 
VVCVLWALPA IRLHRGALAP PKTVQLAGES APELELLVRQ LALQLQVPTP AGIELSPDCD
AWLDPRPGGP VLVIGAPFLW WLRVSELRGL LAPLVAGMAA AGDERIVRAR AFANRSIGAL
HGRPGRTPHV FPSLRRRLAG YFEARAEVLE RVVAWEAVAA SRMIEPAARA YAHEQINMAA
AGWDRVLTRL AQPAWESGYC PVGLNVALVG ALTSLGRRDR MAGSLATRLS ERPACDLLEE
PGDVDARASR MAAELFEGRR IERTVTWERY VTAVTEPELV RRAESVPDEH PVAKRIRTLI
SEAGVPGARQ GGVSDGGTRS AVIPAPRVGE ADGVPSGDVM EPDIDDFAAY LAVRLVEARL
AAWGLDWLDG PVLRDRAGDP VPIHDMAASV ADVGDVSRLS DWLARNLP