Gene Caci_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0276 
Symbol 
ID8331603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp312132 
End bp312746 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content69% 
IMG OID644953443 
Productisochorismatase hydrolase 
Protein accessionYP_003111070 
Protein GI256389506 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGA CGACGCTGGA CCCGAAGACC GCCCTCGTGC TGATCGACCT CCAGCACGGC 
ATCGTCGCCC CTCCGGCGGT CCCCCGCAGC GGCGCGGAGG TGGTGGCGTG CAGCAAGGAG
TTGGCCGACG CCTTCCGTGC CCAGGGACTT CCGGTGGTCC TGGTGAACGT CGCGTTCTCC
CCCGACTTCG GCGACGCCCC GAAGGGACGG GACGACGAAG AGCCGGAGGT CGACGAGAGT
GAAGCAGAGA AGGATGAGGA GGACATGCCC GCCGACTTCG CCGTCATCGT CGACGAACTC
GGCGCGCAGG ACACCGACAT CCGCGTCACC AAGCACCAGT GGGGCGCCTT CCACGGCACC
GACCTGGACA CCCAGCTCCG CCGCCGCGGC GTCACGCAGA TCGTCCTGGC CGGCCTCGTC
ACCAGCCGCG GCGTCGACAC CACCGCGCGG GAGGCGTACG CGCACAACTA CAGCGTCGCC
TTCGCCATCG ACGCGATGGC CGACCGGGGC ATCGAGGTCC ACGAGAACGC GATCGAGCGG
ATCTTCCCGC AGATCGGTCA GCGGGCCACC ACGAAGGAGA TCCTGGCGAT GGTTCAACGC
CTAGGGAACC TCTAG
 
Protein sequence
MALTTLDPKT ALVLIDLQHG IVAPPAVPRS GAEVVACSKE LADAFRAQGL PVVLVNVAFS 
PDFGDAPKGR DDEEPEVDES EAEKDEEDMP ADFAVIVDEL GAQDTDIRVT KHQWGAFHGT
DLDTQLRRRG VTQIVLAGLV TSRGVDTTAR EAYAHNYSVA FAIDAMADRG IEVHENAIER
IFPQIGQRAT TKEILAMVQR LGNL