Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0276 |
Symbol | |
ID | 8331603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 312132 |
End bp | 312746 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644953443 |
Product | isochorismatase hydrolase |
Protein accession | YP_003111070 |
Protein GI | 256389506 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTGA CGACGCTGGA CCCGAAGACC GCCCTCGTGC TGATCGACCT CCAGCACGGC ATCGTCGCCC CTCCGGCGGT CCCCCGCAGC GGCGCGGAGG TGGTGGCGTG CAGCAAGGAG TTGGCCGACG CCTTCCGTGC CCAGGGACTT CCGGTGGTCC TGGTGAACGT CGCGTTCTCC CCCGACTTCG GCGACGCCCC GAAGGGACGG GACGACGAAG AGCCGGAGGT CGACGAGAGT GAAGCAGAGA AGGATGAGGA GGACATGCCC GCCGACTTCG CCGTCATCGT CGACGAACTC GGCGCGCAGG ACACCGACAT CCGCGTCACC AAGCACCAGT GGGGCGCCTT CCACGGCACC GACCTGGACA CCCAGCTCCG CCGCCGCGGC GTCACGCAGA TCGTCCTGGC CGGCCTCGTC ACCAGCCGCG GCGTCGACAC CACCGCGCGG GAGGCGTACG CGCACAACTA CAGCGTCGCC TTCGCCATCG ACGCGATGGC CGACCGGGGC ATCGAGGTCC ACGAGAACGC GATCGAGCGG ATCTTCCCGC AGATCGGTCA GCGGGCCACC ACGAAGGAGA TCCTGGCGAT GGTTCAACGC CTAGGGAACC TCTAG
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Protein sequence | MALTTLDPKT ALVLIDLQHG IVAPPAVPRS GAEVVACSKE LADAFRAQGL PVVLVNVAFS PDFGDAPKGR DDEEPEVDES EAEKDEEDMP ADFAVIVDEL GAQDTDIRVT KHQWGAFHGT DLDTQLRRRG VTQIVLAGLV TSRGVDTTAR EAYAHNYSVA FAIDAMADRG IEVHENAIER IFPQIGQRAT TKEILAMVQR LGNL
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