| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0268 |
|---|
| Symbol | |
|---|
| ID | 8331595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 300047 |
|---|
| End bp | 303094 |
|---|
| Gene Length | 3048 bp |
|---|
| Protein Length | 1015 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644953435 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003111062 |
|---|
| Protein GI | 256389498 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.564116 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGCA CGCACATGCC CAGCACCAGC GAGCCCGCCT TCCACCAGAT GACCTGGACC
CCCGAGGACC TGCGCGCGGC CCTGGAGGCG AACGAGAACG AGCCGCCGGG CCGAGCCCGA
TCGGTCCGCG CCGAGACGCT GTTGGCCGCC GCCGACAAGC TCGGCGACCC CGAGACCCAG
ATCTGCGCCC TGCACACCGT CATCGAAGCC TACGAGCGCG GCGGGGAGAG CTTCCGCTCG
CCGGTGCTCT TCTCCCGCCT CCTGCGCCTG TGGGACCGCC ACGGCAAGAC CCTGCGCGAC
GCGAGCCGTC TGGAATACGA GACGCACTGG GTCTTCAAGT GGATGACCTC CGACCTGCTC
TCGGTCCCCG AGGTCCCGCT GGCGACGGTC ACCGGCTTCG TCGATGAGAT GGAGCGCCGC
TACCGCCTGG CTGGATACGG CATGCGGGCC GTCCACGCGC AGCGCTTCCG CATAGCGGAG
CACCTGGGCG ACACCGCGCA GGCCGAGGTG CACTTCGGAC GCTGGCTGTC GGCCGATCGC
GACCTGATGA GCGACTGCCG CGCCTGCGAG CACCTGACGC AGGGCGTGTG GCGGGCGGAG
AACGGCGACG ACCTCGCCGC GATGCGGCTG TGGCGGCCGA CCGTCGAGAA CGAGATCTCG
TGTCTGGACG AGCCCGCCAG CACTCTTGCC GCGTCCCTGA AGCCACTGCT GCGTCTGCGC
CGCTACGACG AAGCACGCTC GAATCACCTG CGTGGCTACC GCTTGCTGCG CGGACACGTC
GAGCTGCGCA CCGCCTTCGG ACGCCACATC GAGTTCTGCG TGCTGTCTGG AAACGGCGAA
CGCGCCCTGG AGATCCTCGC CGAGAACCGC CGCCTGTTCG ACCCGCCCTA CGAGCCGCTG
GACTACCTCG AGTTCCTGTC CTGCGTCGCG TTGCTGCTGC GCAGCCGGGT CGACGCCGGA
TCGACCGCGA TCGTCGCCGG ACCCGAGGGA CGGGACTGGC CGGTCGCGGA GTTGCTGGCG
CGCGTGCGAT CGGAGATCGA CGACCTCTCC GGACGCTTCG ACCGCCGCAA CGGCACCAAG
GTCGTGAGCG CGCGCGTCGC CGCCACGATG GACCAGACGT GGCTGGTCGC GGAGCTGCCG
CTGATCGTCT CGCAGCGACC GCGACCCCAG CAGTTCCAGA AGCCGGAGCA GGCGCAGCAG
CCCGGCCAGG CGCACGAGCC GGATCAGGCG CCGCTGGCTG CCGTGCCCGC CCAGCGCGAA
CCCGTCGCCG AGCCGCCCGA CCCGGACGCG GACACCGACT TCTACGACCT TCTCGCCGAG
GCGCGCCGGC TGTTCAACGT CGCGCACCCC AGCGCGATGA AGATGTGGGA ACGCGTCGCG
ATCGCGGCCG ATCGCCGAGG CATCGTGCTG GACCTTGAGG CGCAGGCCCA ACTCGCCGAG
GAACGCGCCG CCGAAGCGCT CGACCGCGAG GACATGGACC GGGCCGTCAC GCTGCTCGGC
GAGGCTGTCG AGCGCTACAA GGCAGGTGGG CTGGAAGGGC GCGCGGTCGC GGTGCAGGCG
CGCAGGCTGC TGGCCGAGGC GTTGCAGAAG AAGACCTACG AGCCCATTCC GGAGCAGGCA
CTCGCCGCGC TCTACGCGAC AGCTCGAGTC CTGCAAGCAC GCGGACTGGC CGAGCCGGAG
GACATCCTCA CCGTCCGCCG CGCGCAGGCC TTCGAAGCGC GCAGGACGAC CGAGGTCGGC
GCCGACACCG ACACCGGCAC CGGCACCGAC CGCGACCGCG AATCAGCCTT CGACCACTTC
GCAGCAAGCG TCGAAGCGCT CCTCGCCGAT GCCATCGAGT TCGACGTCCC GGCCCGCGCC
GCCGCCGCGC ACACCATGCG CGCCGAGATC GCCCAGCGGC GCGGTCGGCC GGAGGAATCG
GTCCCGGAGC TGCTGGCGGC CATAGCGCTG TACGACCGCG CCGGGCGTCC GTGGGCGAAT
CTGCACCCGA ACATGCTCCT CGCGCAGGCG TACCTCGCCT CCGACCGCGA CGCAGACGCC
GAGCGCGCCG GGCTGGCCGC CCTGGACATC GCCGAACGCT GGCCCGAGCA GCGGTTCCCG
GCCGGATACA CCCGCCAGGT GCTGGCCAAC GCGACCGGCG GGCAGGGCCG CTACACCGAC
AGCGCCGAGC ACGCGCTGCA TGCCGTCGGC TGGGCCGACC GGCACGGCGT CCCGGACCTG
GCCGCGAGCG CGCGCCACAG CCTGGCGTTC GCCTACGAGC AGCTCGGCCG CGACGCCGAC
GCCGCCGCGA TCCTGGAATC CGCGCTGCCG GAGATGATCC GGCACTTGGA CGACCCGACG
GTCGTCAACG CCCGCTGGGC CCTGGCCCGC TGCCTCGGCC GTCTGGAGGA CTACCGGGGC
GCCGCCGAGC AGTACCTGCT GGCCGCGTCG ATCGCCGAGC ACTTCCCGCA GCAGGGCGGC
CACGCGATGC TCGCGGCGTC CGCCGGACAC GCGCTGCGCG CCGCCGGGCT CGCCGACGAG
GCGCGCCGGG CGTTCGACCG CGCCGTGATC CTGCTGCGCG CGCTGCCGGA CCCGATCAAC
CTCGCCAAGA CCCTCAGGGC CCTGGCCTGG GTGACCTTCG GCGAGTCGGA GGAGACCGCG
CACGACATCG AGCGCGAGGA CGTCCTGGAC CAGGTGCTGC TCCTGTTCGC GGAGGCGGCG
CAGGTCCTGG AGACCGCCGA GGCCTCCGGC GCCTATGAGC GCGACGCCCA GGTCATCGCC
TACGAACTGG CCGAGACCGA CGACCAGCTG GCCCGCCTGC ACCTGAACGC GGACCTGTCC
GACAAGGCGA TGCCGTACGC CGAGCGCGCG GCCGCCGGGT TCCGCGCGCT GCTCCCGCAC
AGCGCGATGG ACTACGACTT CTCCGAGCAG ATGGTCGCCT GGCTGCTGGA CCGGTACGGC
AGCCGCGACG CGGCGGTGGA GCGGCTGCGC GAGGCGATCG CCGCGTGCAC CGAGGCCGGG
GTCGAGGCGG TACGGTGCGT GGCGTTCCTG GAGCAGCTCG GGGACTGA
|
|---|
| Protein sequence | MSSTHMPSTS EPAFHQMTWT PEDLRAALEA NENEPPGRAR SVRAETLLAA ADKLGDPETQ
ICALHTVIEA YERGGESFRS PVLFSRLLRL WDRHGKTLRD ASRLEYETHW VFKWMTSDLL
SVPEVPLATV TGFVDEMERR YRLAGYGMRA VHAQRFRIAE HLGDTAQAEV HFGRWLSADR
DLMSDCRACE HLTQGVWRAE NGDDLAAMRL WRPTVENEIS CLDEPASTLA ASLKPLLRLR
RYDEARSNHL RGYRLLRGHV ELRTAFGRHI EFCVLSGNGE RALEILAENR RLFDPPYEPL
DYLEFLSCVA LLLRSRVDAG STAIVAGPEG RDWPVAELLA RVRSEIDDLS GRFDRRNGTK
VVSARVAATM DQTWLVAELP LIVSQRPRPQ QFQKPEQAQQ PGQAHEPDQA PLAAVPAQRE
PVAEPPDPDA DTDFYDLLAE ARRLFNVAHP SAMKMWERVA IAADRRGIVL DLEAQAQLAE
ERAAEALDRE DMDRAVTLLG EAVERYKAGG LEGRAVAVQA RRLLAEALQK KTYEPIPEQA
LAALYATARV LQARGLAEPE DILTVRRAQA FEARRTTEVG ADTDTGTGTD RDRESAFDHF
AASVEALLAD AIEFDVPARA AAAHTMRAEI AQRRGRPEES VPELLAAIAL YDRAGRPWAN
LHPNMLLAQA YLASDRDADA ERAGLAALDI AERWPEQRFP AGYTRQVLAN ATGGQGRYTD
SAEHALHAVG WADRHGVPDL AASARHSLAF AYEQLGRDAD AAAILESALP EMIRHLDDPT
VVNARWALAR CLGRLEDYRG AAEQYLLAAS IAEHFPQQGG HAMLAASAGH ALRAAGLADE
ARRAFDRAVI LLRALPDPIN LAKTLRALAW VTFGESEETA HDIEREDVLD QVLLLFAEAA
QVLETAEASG AYERDAQVIA YELAETDDQL ARLHLNADLS DKAMPYAERA AAGFRALLPH
SAMDYDFSEQ MVAWLLDRYG SRDAAVERLR EAIAACTEAG VEAVRCVAFL EQLGD
|
|---|
| |