Gene Caci_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0267 
Symbol 
ID8331594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp298052 
End bp300037 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content71% 
IMG OID644953434 
ProductHSP90 family protein 
Protein accessionYP_003111061 
Protein GI256389497 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.979719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCATCCG AGAAGCCGCT GGTCTCCGAG TCCGCGTCCG CCGCCACTGA TGCCGGTGGG 
CGTGGTCTGC CGACTGCTCA TGCCTTTCAG GTGGATCTGC GGGGGATCGT TGATCTGCTG
TCGCATCATC TTTATTCGAG TCCGCGGGTG TTCGTGCGGG AGCTGCTGCA GAACGCGGTG
GATGCGATCA CCGCTCGGCG GGCGGTTGAC GGGGGTGCTC CCGGGGTGGT GCGGATCATC
GCCGACGGGG CGCAGGTGCA GGTCCGGGAC AGTGGGATCG GGCTCACTGA GGACGAGGTG
CACCGGTTTC TGGCCACGAT CGGGCGCAGT TCGAAGCGGG GCGGGGCGGG TGCCGACGGG
TTCGGCGGCG GGGTCGGGGG CGGGTTCGGC GGCGGGTTCG GCGACGCCGA GAGCGTGCTG
GAGCTCGGGC GGAGCGACTT CCTGGGACGC TTCGGTATCG GTTTGCTCGC GTGCTTCGTG
GTGGCCGACG AGATCTCCGT GGTGACGAAG TCCGCCGTGG ACGCGGAGGC GCCGGCGGTC
GAGTGGCGCG GTGCGTCTGA CGGCCATTAC GACATCAGAA TCCTGGCTCC CGAAGAGACT
CCCGCGCAGC CCGGTACGAC CGTCACCCTG AAGCCCAGCC GCGGTAAGGA ATTCTGGTTC
CAGGCGCCGC GTGTCGTGGA GCTCGCCCGT GACTTCGGCA GCCTTCTGCC TTACGAGACC
GTCCTCGAGG ACGAAGCCGG CTACACCTAC CGCATCACCG AGACGCCGCC GGTCTGGGAC
CGCGAATACC CCTCCCCGGG CACCCGCTTC GAAGCGCTGG CCGCCTACTG CCAGGACACC
CTCGGCTTCG CGCCGCTGGA CATCATCGAG CTCAACATCC CGCTGCTGGG GATCAAAGGC
GCCGCCTACA TCCTCCCCAC CGCGGCCACC GCCGCCACCG CGTCGGAGCA GGGCGGCCAC
CGCGTCCACA TCAAGGGCAT GCTGCTCACC GACCAGGCGC GCGGTCTGCT GCCGGACTGG
GCCTTCTTCG TACGCTGCGT CATCGACACC GACGCGCTGC GTCCCACGGC CTCGCGCGAA
GCCCTGTACG AGGACGACCG GCTGGCCGCC GTCCGCGAAG CCCTCGGCAA CCGCGTCCGC
GACTGGCTCG CCGGCCTCGC CGCGACCGAC CCGCCGCGCC TCAACCGCCT CCTGGCGGTC
CACTACCTCG GCGTCAAAGC CCTGGCTCGC TTCGACGACG ACCTGTTCGC CCTCACCCTT
CCGTGGCTCC CCTTCGAGAC CACGTCCGGC CGTCTGCCGC TGACCGCCTT CGCCGACCAG
CACCGCGTCA TCCACCTGAC GGCCGGCGAC GAGGAGTTCC AGCAGGTCTC GCAGATCGCC
GCGGCGGTCG GGCTCGGCGT GGTCAACGGC GGCTACACCT ACGACGCCGA CCTGGTCCGC
AAGCTCCCGC GCGCGCTGCC CGGCGTCACC GTCCTGGACC TGGATCCCGA GACGATCGCC
GCGCACCTGG ACACCGTGGA CTCCGTCGAG GAGCTCGCCG CCGGTCCGCT GCTGGCCACC
GCCCGCCGGG TCCTGGACGT CCAGGACTGC GACGTGGCCC TGCGCGCCTA CCACCCGGTC
ACCATCCCCG CGCTGCTCCT CGACGGCCGC GACGCCCGGC ACGAGCGGGC CCGCGCGGAC
GCCGAGAGCG AGGCCTTGGC CGACGGCGAC GACCTGTGGG CCGGTATCCT CGGCGCGCTG
CGGACGGTCG GGCCGCGGGC ACGCCTGGTC CTGAACCATC GCAGCCCACT GATCCAAGGC
CTGATCGAGC TGGAGGACGC CGAACTGGCC GCCACCGGCA TCGAGGCCGT CTACGGCCAG
GCACTCCTGC TGTCCAAGCG GCCGATCCGC TCCAGCGAGT CGGCCCTGCT CAACCGGGCC
TTCCTGGGGC TGCTCGGCTA CGCGGTCGGA CAACGGCAGG AGCCTGAGAC CGAGGAAGAG
GACTGA
 
Protein sequence
MSSEKPLVSE SASAATDAGG RGLPTAHAFQ VDLRGIVDLL SHHLYSSPRV FVRELLQNAV 
DAITARRAVD GGAPGVVRII ADGAQVQVRD SGIGLTEDEV HRFLATIGRS SKRGGAGADG
FGGGVGGGFG GGFGDAESVL ELGRSDFLGR FGIGLLACFV VADEISVVTK SAVDAEAPAV
EWRGASDGHY DIRILAPEET PAQPGTTVTL KPSRGKEFWF QAPRVVELAR DFGSLLPYET
VLEDEAGYTY RITETPPVWD REYPSPGTRF EALAAYCQDT LGFAPLDIIE LNIPLLGIKG
AAYILPTAAT AATASEQGGH RVHIKGMLLT DQARGLLPDW AFFVRCVIDT DALRPTASRE
ALYEDDRLAA VREALGNRVR DWLAGLAATD PPRLNRLLAV HYLGVKALAR FDDDLFALTL
PWLPFETTSG RLPLTAFADQ HRVIHLTAGD EEFQQVSQIA AAVGLGVVNG GYTYDADLVR
KLPRALPGVT VLDLDPETIA AHLDTVDSVE ELAAGPLLAT ARRVLDVQDC DVALRAYHPV
TIPALLLDGR DARHERARAD AESEALADGD DLWAGILGAL RTVGPRARLV LNHRSPLIQG
LIELEDAELA ATGIEAVYGQ ALLLSKRPIR SSESALLNRA FLGLLGYAVG QRQEPETEEE
D