Gene Caci_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0262 
Symbol 
ID8331589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp294505 
End bp295530 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content67% 
IMG OID644953429 
Producthypothetical protein 
Protein accessionYP_003111056 
Protein GI256389492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.221437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.39253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTTCG ACGAGCCGGA CGGCTACCGG GACGACCTGG GCCGGACGCG TGACGACGGA 
TCGCGGTATC CGGCTTCGGG GTCGCCTGAC TCCGAGTACG GCGACGACGA TGATTACGAC
GATTCCGATC CCGGCGACGA ACCGACCGCG CCGCTGCCGA CCCGCGGGCG GCCGGTCGTG
CCGCCGGAAC CGCCGTCGGA GTGGCGCAAG CGGGGTTCGC GGGTCTGGCG TTTCACCCGC
ACGCTGCTGA TCACGGTGCT GGTCCTGGTC GGGCTGGCGG CGGTCGGGAA CGTGCTGATC
AACCGCTACC CGCGCATCAG CAAGCACACG TATACGTACA CGAACGTGCA GCGGATGCTG
ATAGCCGTGG ACGGCAACGG CTCGATCAAC GTCACCGGCT CGGACACCGA TCAGGTGACC
ATCAAGGCGA CCGACCGGGC GACCCTGCTG GACCCGGTGG AGCGCCAGAT CATCAGCGCC
GGCGGCTATC TGCTGGTGAG CGTGCACTGC CCGAACAGCG AGTGCTCCTC GAAGTACACC
ATCCAGGTCC CGCGCTCGAT GTCGGTCGAG GCGATGATGG ACCACTCCAG CGACCAGGCG
GACATCAGCG CCACCGGACT GGACGCGGCG GTGCAGCTGT TCACCGGGCG CGGCAACGTC
ACGGTGAACC ATCTGGCCAC CACCTCCGAC GTGAGCGTGA CGGCCAACGG CCAGGTCGTG
GCGAACGACG TGAGCGCGGC GAACCTGGAC GTCTTCGCCC CGATCGGGGA CAAGATCGAC
CTGCAGGTGA GCGGCGACAT CTCGAACATC CAGAACATCC GCGTCACGGC CGGGCAGCCG
GCCGAGGTGA CGCTGAAGGT GCCGGCCGGC GGGTACCGGT TCGCGTGCGT GCCCGCCGGG
CACTGCACCG GCGCCAACGG GGACATCACG CAGGATGAGG CGAGTCCGGT GCACGAGGAT
CAGACGTCGA CGCACAACAT CCAGGTGAAC GTGGTACAGA ACACTGCGAA GATCCAGGCG
AACTGA
 
Protein sequence
MSFDEPDGYR DDLGRTRDDG SRYPASGSPD SEYGDDDDYD DSDPGDEPTA PLPTRGRPVV 
PPEPPSEWRK RGSRVWRFTR TLLITVLVLV GLAAVGNVLI NRYPRISKHT YTYTNVQRML
IAVDGNGSIN VTGSDTDQVT IKATDRATLL DPVERQIISA GGYLLVSVHC PNSECSSKYT
IQVPRSMSVE AMMDHSSDQA DISATGLDAA VQLFTGRGNV TVNHLATTSD VSVTANGQVV
ANDVSAANLD VFAPIGDKID LQVSGDISNI QNIRVTAGQP AEVTLKVPAG GYRFACVPAG
HCTGANGDIT QDEASPVHED QTSTHNIQVN VVQNTAKIQA N