Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0261 |
Symbol | |
ID | 8331588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 292147 |
End bp | 294393 |
Gene Length | 2247 bp |
Protein Length | 748 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644953428 |
Product | protein of unknown function DUF224 cysteine-rich region domain protein |
Protein accession | YP_003111055 |
Protein GI | 256389491 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.618986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.510874 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTCG CAGCCATCGT CGTCTCGCTG GTGATCTCAG TCATCGGCTT CGGTCTGCTG GGCCGGACCG CCGTCTATAT CTACCAGTTC GTGAAGCTCG GCCAGTCGAC CGCGCCGGGG GTGCGCAGCA ACGAGCCGTT GGAGCGGACC CGGAACCTCT TCCGGGAGTT CCTGGGCCAC ACCCGGCTGG CGCGCAAGGG CAAGCGCTGG ATCGGCGCCA TGCACTGGGT GGTCATGGTC GGCTTCGGCC TGCTGTTCTT CACCCTGGTC ACCGCCTACG GCCAGCTGTT CTCGGCGGAC TTCGCGATCC CGCTGATCGG GCGCTGGTGG CCCTTCGAGT TCGTCACCGA AGTGATCAGC TTCGTGATGA TCCTGGCCAT CGCCGCGCTG ATCGGCATCC GCCTGCGCAA CCGCCCCGCC GGTGCCGGCT CCAAGGAGAA GGGCAAGCGC TCGCGCTTCT TCGGCTCCAC GATGTGGCAG GCCTACTTCG TCGAGGGAGT CATCCTCGGC ATCGGGCTGT GCATCATGCT GCTGCGCGGC TTCGAGGGCG CACTCGGCGG CCACCTCTCC TACAGCGCGC ACTACCCGGT CAGCTACCCG CTGGTCCACG CCTTCGACGG CATGTCGCGC GGCTCGCTGG AGAACTGGAT CTACGCGATC GCCGCGGTCA AGATCGTCAT CTCCATGGCC TGGGCCATCA CCATCGGCTT GAACTCCACG ATGAGCGTGG CATGGCACCG GTTCCTGGCG TTCCCCAACA TCTGGTTCAA GAAGAAGGCC GACGGCGGCA CCGCGCTCGG CGCGCTGAGC CCGATGGCCT CCGGCGGCGT GCCGATCGAC TTCGAGGACC CGGCCGAGGA CGCCAGGTTC GGCGTCGGGG CGGTCGAGGA CTTCACGTGG AAGGGCCTGC TGGACTTCTC GACCTGCACC GAGTGCGGCC GCTGCCAGGA CCAGTGCCCG GCGTGGAACA CCGACAAGCC GCTGTCCCCG AAGCTGCTGA TGCTCGCCCT GCGCGACCAC TCCGCGGCCA AGGCGCCGTA CCTGTTCGCC GGCGGCGGCA AGGACCTCGA GGGCAACGAG AAGCTGGCCG AGGAGAAGTG GCTCTCGCTG CCGGACATGG TCCGCGCCGA GGCTGAGCGC CCGCTGATCG GCACCGCTGA AGAGAACGGC GTCATCGACC CGGACATTCT GTGGTCCTGC ACCACCTGTG GCGCTTGTGT CGAGCAGTGC CCGGTGGACA TCGAGCACGT GGACCACATC GTCGACATGC GCCGCTACCA GGTGATGATC GAGTCCTCGT TCCCGTCCGA GGCGGGCACG ATGCTGAAGA ACCTGGAGAA GGCACAGAAC CCTTGGGGTA TGCAGCCCAA GAAGCGCACC GAGTGGATCC AGGAGCTGGA CTTCGAAGTC CCGGTGTTCG GCGAGACTCT GGAGGACATC TCCGAGGTCG AGTACCTCTA CTGGGTCGGC TGCGCCGGCT CGCTGGAGGA CCGCGCGAAG AAGACCACGA AGGCGTTCGC CGAGCTGCTG CACATCGCCG GTGTGAAGTT CGCGGTTCTG GGCGGCATGG AGTCCTGCAC CGGTGACCCG GCGCGGCGAC TGGGCAACGA GTTCCTGTTC CAGATGCTGG GGCAGGGCAA CGTCGAGATG CTGAACGAGG TCTTCGGCGA AGACACCCCG CGCGAGAAGC GCAAGATCGT CGCGACCTGC CCGCACTGCT TCAACTCGCT GGCCAACGAG TACCCGCAGC TCGGCGGCGA GTACGACGTC ATCCACCACA CGCAGCTGCT GGACACCCTG GTCTCCGAGG GCAAGCTGAC CCCGGTGACG CCGATCGACC AGAACATCAC CTACCACGAC CCGTGCTACC TGGGCCGCCA CAACAAGGTC TACACCCCGC CGCGCGAAAT CATCGCCAAG GTGCCCGGCC TGAAGAACAC CGAGATGCAC CGCTGCAAGG AGAAGGGCTT CTGCTGCGGC GCCGGCGGCG CGCGCATGTG GATGGAGGAG CGCATCGGCA AGCGGATCAA CGTCGAGCGC GTGGACGAGG CACTGTCCAC CAACCCCGAC GTGATCTCCA CGGCGTGCCC CTACTGCCTG GTCATGCTCG GCGACTCGAT CACCGCGCGC AAGCAGGCCG GCGAGGTCCC GGAGTCGATG GAGGTGGTCG ACGTCGCGCA GCTGCTGCTG ACGTCGGTGA AGCCCGCGCC GGCCAGCAGC GCGGAACCGG CTGCCGCCAA CGCCTGA
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Protein sequence | MQLAAIVVSL VISVIGFGLL GRTAVYIYQF VKLGQSTAPG VRSNEPLERT RNLFREFLGH TRLARKGKRW IGAMHWVVMV GFGLLFFTLV TAYGQLFSAD FAIPLIGRWW PFEFVTEVIS FVMILAIAAL IGIRLRNRPA GAGSKEKGKR SRFFGSTMWQ AYFVEGVILG IGLCIMLLRG FEGALGGHLS YSAHYPVSYP LVHAFDGMSR GSLENWIYAI AAVKIVISMA WAITIGLNST MSVAWHRFLA FPNIWFKKKA DGGTALGALS PMASGGVPID FEDPAEDARF GVGAVEDFTW KGLLDFSTCT ECGRCQDQCP AWNTDKPLSP KLLMLALRDH SAAKAPYLFA GGGKDLEGNE KLAEEKWLSL PDMVRAEAER PLIGTAEENG VIDPDILWSC TTCGACVEQC PVDIEHVDHI VDMRRYQVMI ESSFPSEAGT MLKNLEKAQN PWGMQPKKRT EWIQELDFEV PVFGETLEDI SEVEYLYWVG CAGSLEDRAK KTTKAFAELL HIAGVKFAVL GGMESCTGDP ARRLGNEFLF QMLGQGNVEM LNEVFGEDTP REKRKIVATC PHCFNSLANE YPQLGGEYDV IHHTQLLDTL VSEGKLTPVT PIDQNITYHD PCYLGRHNKV YTPPREIIAK VPGLKNTEMH RCKEKGFCCG AGGARMWMEE RIGKRINVER VDEALSTNPD VISTACPYCL VMLGDSITAR KQAGEVPESM EVVDVAQLLL TSVKPAPASS AEPAAANA
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