| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0260 |
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| Symbol | |
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| ID | 8331587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 291017 |
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| End bp | 291988 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644953427 |
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| Product | transcriptional regulator, RpiR family |
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| Protein accession | YP_003111054 |
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| Protein GI | 256389490 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.379912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACCC CAGAGCCTGT GACTCCTACT ACATCGGCAG AGATTGCTGC TCCGCCGTCT
GTGACTCCTG CTACACCGGC TGCCGCCTCC GCCGCGTCAG CCGGCTCACG CCTCTCCTCC
ACCCTGCCAC CTGCGGACGA ACTGCTGGCG CTGCTGGACG GGCGGCGCCT GTCGCCGGCA
CAGCGGCGGA TAGCGCACTA CCTCCTAGAG AACCTCCCCG AGGTCGCCTT TCTGTCGAGC
ATGGAGCTGG CCGAACGCGT CGGCGTGAGC CAGCCGTCGG TGACCAGGTT CGCGGCGGCG
TTGGGCTTCT CGGGTTACCC GGAGCTGCGG GCTGCGCTGC GCCCGATCGC ACTGCGCGTC
CCTGAGGCGG GTATACACGG GGAACGCATA GCGGGGAACG AGCTGCATTC CGCTCTAGAG
AGCGACCAGG CGAACCTGGA AGCGCTCCAC AAGTACGCCG CCGACCCGGC GCGCCTGTCG
CGTCTGGGCA GCGACCTCGC CGCCTCAGAA CCGCTCTCCG TGATCGGCCT AAGGATGTCC
GCGCCTGTCG CCTCCTACTT CGCGTATGGA GCCGCGCGTA TCCATCCCGA CGTACGGGTG
GTCCACACGC CGGGTTCACT GGCGCACGAG GCACTGTTGC AGGCCGTCGC GGCCGGCGGG
ACGTGGCTCG TCGTCTTCGT GCTGCCGCGC TATCCGGCCG AGTCCGTCGT CGTCCTACGG
AGTGCGCGGG AACTCGGGCT CAAGACAGCG GTGATCACGG ACGTGCCGCT GGTGCCGTTC
GCTCATTTGG CGGATGTGCT GCTGCCGGTC GGCGTCGGAT CACGCTCGGT CTTCGACTCG
CACGCCGCAC CGATGGCCTT CGCCGCCCTC CTGCTCCAGG CTCTCGCCGA CGCCGCCCCG
GAGCGGACGC AGGAGCGGCT GGAGGCGTAC GAGGCGCTCG CGGAGACCCG CGGCTTCTAC
GTCAGCAAGT GA
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| Protein sequence | MTTPEPVTPT TSAEIAAPPS VTPATPAAAS AASAGSRLSS TLPPADELLA LLDGRRLSPA
QRRIAHYLLE NLPEVAFLSS MELAERVGVS QPSVTRFAAA LGFSGYPELR AALRPIALRV
PEAGIHGERI AGNELHSALE SDQANLEALH KYAADPARLS RLGSDLAASE PLSVIGLRMS
APVASYFAYG AARIHPDVRV VHTPGSLAHE ALLQAVAAGG TWLVVFVLPR YPAESVVVLR
SARELGLKTA VITDVPLVPF AHLADVLLPV GVGSRSVFDS HAAPMAFAAL LLQALADAAP
ERTQERLEAY EALAETRGFY VSK
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