| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0252 |
|---|
| Symbol | |
|---|
| ID | 8331579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 283076 |
|---|
| End bp | 284329 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644953419 |
|---|
| Product | allantoate amidohydrolase |
|---|
| Protein accession | YP_003111046 |
|---|
| Protein GI | 256389482 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.297856 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCTTGT TCTCTGTCCA CAGGGCTGTG GACGAGGCGG AGGCGAGTGC CTACAGCGAC
ATGTGGCGCT CGCTTCTGCC CCTCGGCCTG AACTCCGACA CCGGCGGCTA CCGCCGTTTC
GCTTGGAACA CCGCGGATCT GGCGTGCCGC GACTGGTTCC GCTCCGAGGC CGCCGCGCGC
GGCTTGGAGG TGGAGACCGA CCGCAACGGC AACCTGTGGG CGTGGTGGGG ACCGAAGGGT
CCCGGCGCGA TCGTCACCGG TTCGCACTTG GACTCGGTGC CCGACGGCGG TGCTTTCGAC
GGGCCGCTCG GCGTGGTGTC GTCGTTCGCG GCGGTCGACG TGTTGCGTGC TCGCGGATTC
ACTCCGGCCA AGCCTTTCGC AGTGGCCTGT TTCTCGGACG AGGAAGGCGC GCGATTCGGT
ATTGCCTGCG CGGGGTCTCG CTTGATGACG GGCGCGCTGT CCGCTGAGAA GGCGCGCGGT
CTGTGCGATC TGGACGGCGT CACGATGGCG TCGGCGATGG AGCAGGCGGG ACAGGACCCT
GCGACGCTCG GGCGCGACGA CGAGCGGTTG GAAGGCATCG CCGCCTACGT CGAGCTGCAC
GTCGAGCAGG GCAAGGCGCT GGCCTTCACC GAGTCGCCGG TCGCGGTGGC CTCGGCGATC
TGGCCGCACA GCCGCTGGCG CTTCGAGTTC GCCGGCGAGG CCAACCACGC CGGGACCACC
CGGCTGGAGG ATCGGCGCGA CCCGATGCTC ACGTATGCCA ACGCGGTGCT GGCAGCCCGG
AAGAAGGCGA AGCTCGGCGG GGCGGTTGCG ACGTTCGGGC GACTGGTCGT CGAGCCCAAC
GGCACGAACG CCATCCCTTC GCGAGTGCGC GCCTGGCTGG ACGTTCGGGC CCCGGCCGAT
GAGATCCTGG CAGCCGTGAC CGAGGAGATC ATCAAAGCCG CCGACGAGCG GGCCGGCCGG
GACGGCACGG TTCTGAGCAC CGAAAGGGAG TCGCACACGC CGGTCGTGGA ATTCGACGAC
GTTTTGAGGA ACCGTCTGGC GGGCAGTCTT CGTCAAACGT TCGGCGCCGT CCCCGTGCTG
CCGACTGGTG CGGGGCACGA CGCCGGAATC CTGGCGGCGG CCGTACCGAC CGCGATGCTG
TACGTCCGCA ACCCCACCGG CGTGTCCCAC GCGCCCGGCG AGCACGCGGA CGACCGCGAC
TGCCTGGCCG GGGTGACCGC ACTCGCCGAC GTGTTGCAGG AGCTGTGCCA GTGA
|
|---|
| Protein sequence | MSLFSVHRAV DEAEASAYSD MWRSLLPLGL NSDTGGYRRF AWNTADLACR DWFRSEAAAR
GLEVETDRNG NLWAWWGPKG PGAIVTGSHL DSVPDGGAFD GPLGVVSSFA AVDVLRARGF
TPAKPFAVAC FSDEEGARFG IACAGSRLMT GALSAEKARG LCDLDGVTMA SAMEQAGQDP
ATLGRDDERL EGIAAYVELH VEQGKALAFT ESPVAVASAI WPHSRWRFEF AGEANHAGTT
RLEDRRDPML TYANAVLAAR KKAKLGGAVA TFGRLVVEPN GTNAIPSRVR AWLDVRAPAD
EILAAVTEEI IKAADERAGR DGTVLSTERE SHTPVVEFDD VLRNRLAGSL RQTFGAVPVL
PTGAGHDAGI LAAAVPTAML YVRNPTGVSH APGEHADDRD CLAGVTALAD VLQELCQ
|
|---|
| |