| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0251 |
|---|
| Symbol | |
|---|
| ID | 8331578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 281646 |
|---|
| End bp | 283079 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644953418 |
|---|
| Product | N-formimino-L-glutamate deiminase |
|---|
| Protein accession | YP_003111045 |
|---|
| Protein GI | 256389481 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | [TIGR02022] formiminoglutamate deiminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.421015 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTTCCT CCGAGAACCC GCAGACCGCG ACCACGATCC CGGCCACTAC TCCCTCCCCG
AACGGCGGCG CCGCCAGCGC CGGCGCCGAC CGGCGCGCGT TCTGGTGCGA ACTCGCCTGG
ATCAACGGCG AGATCAAGAG CAAGGTCCTC ATCGAGGTCG CCGGCGGGCA GATCTCCGCG
GTCACCTGCG GCGTGAAACC CCGCCCCCAG AACGCCGAGA AACTGACCGG CCTGACCATC
CCGGGCCTGG CGAACGTCCA CTCCCACGCC TTCCACCGAG CCCTGCGCGG CCGCACCCAG
ATCGAGTCCG GCACCTTCTG GACCTGGCGC GAACGCATGT ACGCCGCCGC CGCGCACCTG
GACCCGGACT CCTACCGCGA ACTGGCCACC GCGGTCTTCG CGGAGATGGC ACTGGCCGGC
GTCACAGCCG TCGGGGAGTT CCACTACGTA CACCACTCGC CCAAGGGCGG CCTGTATCAG
GACCCGAACG CCATGGGCCA CGCCCTGACC GAGGCCGCCG AGGCCGCGGG CATCCGCATC
ACCCTGCTGG ACACGTGCTA CCTGTCCGGC GGCTTCGACA ACGAACTGAA CGACGTCCAG
CGGCGCTTCT CCGACGGCGA CGCCGGCCGC TGGGCCGAAC GCGTCGAGGC ACTCCGCAAG
GCTTATGCGG GCTCTGACAC GGTACGCATC GGCGCGGCGG TGCACAGCGT CCGCGCCGTC
CCCGTCGATC AGCTCTCCCC GGTGGTGGCC TTCGCGGCGG AGAACGAAAT GCCCCTGCAC
GTCCACCTGT CCGAGCAGCG CGCGGAGAAC GACGCCTGCC TGGCCCGCCA CCACAAGACC
CCCACCGAAC TCCTGCACGC CCACGGCGCC CTCGGCCCGC GCACCACCGC CGTCCACGCC
ACACACCTGT CCCAAATGGA CATCGACCTC CTCGGCACCT CCGCCACGGC GGTCTGCATG
TGCCCCACCA CCGAACGCGA CCTGGCCGAC GGCATCGGCC CAGCCCACGC AGTCCACCTC
GCAGGCTCCC CCGTCAACCT GGGCACCGAC TCCCACGCCA TGATCGACCT CTTCGAAGAA
GCCCGAGCCG TAGAACTCGA CGAACGCCTC CGCACCGAAC GCCGAGGCCA CTGGCTAGCC
TCCGAACTCC TCCAAGCCGC CACCACCGAC GGCCACGCCT CCCTAGGCTG GCCCACCACA
GGCCGCCTGC AACCCGGCAC CCCCGCCGAC TTCACCACCA TCGCCCTCGA CACCGTCCGC
CTAGCCGGCG TCCAACCCGC CCACGCCGCC GAATCAGTGA TCTTCGCCGC CACCGCCGCC
GACGTCCGCC ACGTCGTGGT CGCCGGTAAG TTCACGGTCC GCGACCATCA GCACATGCTG
GTCGACGACG TGCCGGGACG CCTGGCCGCG ACGATCGGGG CGATCTTCAA GTAG
|
|---|
| Protein sequence | MTSSENPQTA TTIPATTPSP NGGAASAGAD RRAFWCELAW INGEIKSKVL IEVAGGQISA
VTCGVKPRPQ NAEKLTGLTI PGLANVHSHA FHRALRGRTQ IESGTFWTWR ERMYAAAAHL
DPDSYRELAT AVFAEMALAG VTAVGEFHYV HHSPKGGLYQ DPNAMGHALT EAAEAAGIRI
TLLDTCYLSG GFDNELNDVQ RRFSDGDAGR WAERVEALRK AYAGSDTVRI GAAVHSVRAV
PVDQLSPVVA FAAENEMPLH VHLSEQRAEN DACLARHHKT PTELLHAHGA LGPRTTAVHA
THLSQMDIDL LGTSATAVCM CPTTERDLAD GIGPAHAVHL AGSPVNLGTD SHAMIDLFEE
ARAVELDERL RTERRGHWLA SELLQAATTD GHASLGWPTT GRLQPGTPAD FTTIALDTVR
LAGVQPAHAA ESVIFAATAA DVRHVVVAGK FTVRDHQHML VDDVPGRLAA TIGAIFK
|
|---|
| |