Gene Caci_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0249 
Symbol 
ID8331576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp278772 
End bp280166 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content71% 
IMG OID644953416 
Productputative cell wall binding repeat 2-containing protein 
Protein accessionYP_003111043 
Protein GI256389479 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2247] Putative cell wall-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.65229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.312319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA GAACATCCAG CCTGCTCACC GCCATCGCGC TGGTGTCGGG AGCGGCCGCC 
TCGACGCTGG CGGTCGCGCC GGCGCAGGCC GCGACCGACT CCGGGACGTG CGCCTCGGGC
TCCGAGAAGC AGGGTCCGAT CAGCTTCAAC CCGTCTGCCG CGGTGGCTCC CGCGACCATC
GGGATCCGCG TCGCCGCCAA CACCATCGAC GCGGCGAACG GCTGCAAGGC TGTGTTGGAC
TTCGGCGACG GCACGTCCAC GGCGCTGTCG ACCGACGCGG ACGTGGCGCA CACGTACACC
AACCCCGGCG ACTACCGGGT CACTTTGACG CTGCAGTGGC CGGGCTACTC CCCGGCCGTC
GAGAGCGGCC ACCTGCTGAT CGGGGGCGCT GCCGGGCAGG CGCAGATCAC GCGGATCGCC
GGCGCGGACC GGCTGGACAC CGCGGTGCAG ATCTCGCAGA AGCAGTGGCT CACGGTCGAT
CCGAAGAGCA GCTGGGGTCA GGCGCAGACG GCGGTCATCG CGACCTCCGG TACCTTCCCC
GACGCCCTCG CCGGCGGGCC GCTGGCCGCG TACAAGCGCG GTCCGTTGCT GCTGACCCCG
CCGAACGCGG GTCTGTACGG CGCGGCCAAC GACGAGATCA ACCGGGTCGT GCCGAAGGGC
CGCACCATCT TCATCCTCGG CGGGTACGCC GCGGTGTCGG CCTCGGTCGA CCAGCAGCTG
ATCACCGAGG GCTACAAGGT CCAGCGCTTC GCCGGCCAGA CCCGCTTCGA CACCGCGCTG
CAGGTCGCGA AGTTCGGCCT GGGCGACCCG GCGAACGTGG TCGTCGCCAC CGGCACCGAC
TTCCCGGACG CCCTGTCCGC CGGTCCGCTG GCCGCCGGTC CCCGCGCCAC CGAGGTCGCC
GGCCAGGCGC CGCAGCCGGC CGCGATCATC CTGACCAACG GCGCGAAGTT CTTCGACCCG
AGCACCTCGG CGTACGTCAA GGGCAAGCTC GGCACGGCGA ACTGCAACGC GGTGACTGCT
GTTGGTGGCG CTGCGGTGCA CGCGTTGGGC GCGCTGGCCG GCGGCCTGTG CCACAGCGAG
CTGTCCGGCG CCGACCGGTA CGCGACCTCC GCGAAGGTGT TCGGCGAGTT CTCACTGACC
TACCTCGTCG GCGTGGCCAG CGGCACGACC TTCGCCGACG CCCTGACCGG CGCCGCGTAC
GTGGCGAACG TGCAGCAGCC GCTGCTGCTG ACCGACCCGA CCCACCTGCC CGACCCCATC
GGCGCCTACT TCGACGCCAT GGGCAAGCAG GCCGGGATCT CCTACGTCGA CGTCTTCGGC
GGCCCGAAGG CGATCACCGA CCACGTGTAC GGGCAGATCG CGGACGCGGC GCACAGCGGG
GAGTACAACC CGTGA
 
Protein sequence
MKRRTSSLLT AIALVSGAAA STLAVAPAQA ATDSGTCASG SEKQGPISFN PSAAVAPATI 
GIRVAANTID AANGCKAVLD FGDGTSTALS TDADVAHTYT NPGDYRVTLT LQWPGYSPAV
ESGHLLIGGA AGQAQITRIA GADRLDTAVQ ISQKQWLTVD PKSSWGQAQT AVIATSGTFP
DALAGGPLAA YKRGPLLLTP PNAGLYGAAN DEINRVVPKG RTIFILGGYA AVSASVDQQL
ITEGYKVQRF AGQTRFDTAL QVAKFGLGDP ANVVVATGTD FPDALSAGPL AAGPRATEVA
GQAPQPAAII LTNGAKFFDP STSAYVKGKL GTANCNAVTA VGGAAVHALG ALAGGLCHSE
LSGADRYATS AKVFGEFSLT YLVGVASGTT FADALTGAAY VANVQQPLLL TDPTHLPDPI
GAYFDAMGKQ AGISYVDVFG GPKAITDHVY GQIADAAHSG EYNP