Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0249 |
Symbol | |
ID | 8331576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 278772 |
End bp | 280166 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953416 |
Product | putative cell wall binding repeat 2-containing protein |
Protein accession | YP_003111043 |
Protein GI | 256389479 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2247] Putative cell wall-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.65229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.312319 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCA GAACATCCAG CCTGCTCACC GCCATCGCGC TGGTGTCGGG AGCGGCCGCC TCGACGCTGG CGGTCGCGCC GGCGCAGGCC GCGACCGACT CCGGGACGTG CGCCTCGGGC TCCGAGAAGC AGGGTCCGAT CAGCTTCAAC CCGTCTGCCG CGGTGGCTCC CGCGACCATC GGGATCCGCG TCGCCGCCAA CACCATCGAC GCGGCGAACG GCTGCAAGGC TGTGTTGGAC TTCGGCGACG GCACGTCCAC GGCGCTGTCG ACCGACGCGG ACGTGGCGCA CACGTACACC AACCCCGGCG ACTACCGGGT CACTTTGACG CTGCAGTGGC CGGGCTACTC CCCGGCCGTC GAGAGCGGCC ACCTGCTGAT CGGGGGCGCT GCCGGGCAGG CGCAGATCAC GCGGATCGCC GGCGCGGACC GGCTGGACAC CGCGGTGCAG ATCTCGCAGA AGCAGTGGCT CACGGTCGAT CCGAAGAGCA GCTGGGGTCA GGCGCAGACG GCGGTCATCG CGACCTCCGG TACCTTCCCC GACGCCCTCG CCGGCGGGCC GCTGGCCGCG TACAAGCGCG GTCCGTTGCT GCTGACCCCG CCGAACGCGG GTCTGTACGG CGCGGCCAAC GACGAGATCA ACCGGGTCGT GCCGAAGGGC CGCACCATCT TCATCCTCGG CGGGTACGCC GCGGTGTCGG CCTCGGTCGA CCAGCAGCTG ATCACCGAGG GCTACAAGGT CCAGCGCTTC GCCGGCCAGA CCCGCTTCGA CACCGCGCTG CAGGTCGCGA AGTTCGGCCT GGGCGACCCG GCGAACGTGG TCGTCGCCAC CGGCACCGAC TTCCCGGACG CCCTGTCCGC CGGTCCGCTG GCCGCCGGTC CCCGCGCCAC CGAGGTCGCC GGCCAGGCGC CGCAGCCGGC CGCGATCATC CTGACCAACG GCGCGAAGTT CTTCGACCCG AGCACCTCGG CGTACGTCAA GGGCAAGCTC GGCACGGCGA ACTGCAACGC GGTGACTGCT GTTGGTGGCG CTGCGGTGCA CGCGTTGGGC GCGCTGGCCG GCGGCCTGTG CCACAGCGAG CTGTCCGGCG CCGACCGGTA CGCGACCTCC GCGAAGGTGT TCGGCGAGTT CTCACTGACC TACCTCGTCG GCGTGGCCAG CGGCACGACC TTCGCCGACG CCCTGACCGG CGCCGCGTAC GTGGCGAACG TGCAGCAGCC GCTGCTGCTG ACCGACCCGA CCCACCTGCC CGACCCCATC GGCGCCTACT TCGACGCCAT GGGCAAGCAG GCCGGGATCT CCTACGTCGA CGTCTTCGGC GGCCCGAAGG CGATCACCGA CCACGTGTAC GGGCAGATCG CGGACGCGGC GCACAGCGGG GAGTACAACC CGTGA
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Protein sequence | MKRRTSSLLT AIALVSGAAA STLAVAPAQA ATDSGTCASG SEKQGPISFN PSAAVAPATI GIRVAANTID AANGCKAVLD FGDGTSTALS TDADVAHTYT NPGDYRVTLT LQWPGYSPAV ESGHLLIGGA AGQAQITRIA GADRLDTAVQ ISQKQWLTVD PKSSWGQAQT AVIATSGTFP DALAGGPLAA YKRGPLLLTP PNAGLYGAAN DEINRVVPKG RTIFILGGYA AVSASVDQQL ITEGYKVQRF AGQTRFDTAL QVAKFGLGDP ANVVVATGTD FPDALSAGPL AAGPRATEVA GQAPQPAAII LTNGAKFFDP STSAYVKGKL GTANCNAVTA VGGAAVHALG ALAGGLCHSE LSGADRYATS AKVFGEFSLT YLVGVASGTT FADALTGAAY VANVQQPLLL TDPTHLPDPI GAYFDAMGKQ AGISYVDVFG GPKAITDHVY GQIADAAHSG EYNP
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