| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0231 |
|---|
| Symbol | |
|---|
| ID | 8331557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 259902 |
|---|
| End bp | 260978 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644953397 |
|---|
| Product | clavaminate synthase |
|---|
| Protein accession | YP_003111025 |
|---|
| Protein GI | 256389461 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0669092 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.226124 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACC TGTCTGCGTA TGAAGTGTAT GAATCGCCGA AGACCAGCGG AGAGTCACGT
ACCGAAGCCG TTTCGGAGGC CGCCTTCGAA TCCGACCCCG AAGTGAGCGC AATCCTAGTC
CTGACCTCCT CCGAAGCCTC GACGCTGGAG CGCGTCGCCG ACCTCGTGAC CGCGCACGCG
CTGTATGCCG CTCACGATTT CTGTGCCCAG GCCCAGCTGG CCGCCGCCGA ACTGCCGTCG
CGGGTCGTTG CCCGGTTGCA GGAGTTCGCC TGGGGCGACA TGAACGAGGG CCACCTTCTG
ATAAAAGGCC TGCCGCAGGT CCGCTCCCTG CCACCGACAC CGACGTCCAA CGTGCACGCC
GTCGCCGCGA CGACGCCGAT GTCGCGCTAC CAGGCCCTCA TCAATGAGTG CGTGGGGCGC
ATGATTGCCT ACGAGGCCGA GGGGCACGGC CACACCTTCC AGGACATGGT CCCGAGCGCC
ATGAGCGCGC ACTCGCAGAC CAGTCTCGGC TCGGCGGTTG AGCTCGAACT GCACACCGAG
CAGGCCTTCA GTCCGCTGCG TCCGGACTTC GTCAGCCTGG CCTGTCTTCG CGGCGATCCA
CGAGCCCTGA CTTACCTGTT CTCGGCCCGG CAACTGGTCG CGACGCTGAC GACACAGGAA
ATCGCCATGC TGCGCGAGCC CATGTGGACC ACCACCGTCG ACGAGTCCTT CCTGGCGGAG
GGGCGTACGT TCCTGCTCGG CTTCGAGCGC GGTCCGATCC CGATATTGAG CGGTGCCGAC
GACGATCCGT TCATCGTCTT CGACCAGGAT CTGATGCGGG GGATCTCGGC GCCCGCGCAG
GAACTCCAAC AGACTGTGAT CCGCGCCTAC TATGCCGAGC GCGTCAGCCA CTGCCTCGCA
CCCGGTGAGA TGCTCCTCAT CGACAACCGG CGCGCCGTCC ACGGCAGGTC GATCTTCGCC
CCGCGTTTCG ACGGCGCTGA CCGGTTCCTT TCCAGAAGCT TCATCGTGGC CGACGGATCG
CGCAGTCGGC ACGCGCGTTC TTCCTTCGGC CGCGTCGTCT CTGCGAGGTT CAGCTGA
|
|---|
| Protein sequence | MKNLSAYEVY ESPKTSGESR TEAVSEAAFE SDPEVSAILV LTSSEASTLE RVADLVTAHA
LYAAHDFCAQ AQLAAAELPS RVVARLQEFA WGDMNEGHLL IKGLPQVRSL PPTPTSNVHA
VAATTPMSRY QALINECVGR MIAYEAEGHG HTFQDMVPSA MSAHSQTSLG SAVELELHTE
QAFSPLRPDF VSLACLRGDP RALTYLFSAR QLVATLTTQE IAMLREPMWT TTVDESFLAE
GRTFLLGFER GPIPILSGAD DDPFIVFDQD LMRGISAPAQ ELQQTVIRAY YAERVSHCLA
PGEMLLIDNR RAVHGRSIFA PRFDGADRFL SRSFIVADGS RSRHARSSFG RVVSARFS
|
|---|
| |